RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 OAS2P29728 719 aaKnown RBP12.08□□□□□ -0.48
COPB1-208ENST00000532088 PIK3CGP48736 1102 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 PPP2R2AP63151 447 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 ABATP80404 500 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 PCDH1Q08174 1060 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 SLC5A12Q1EHB4 618 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 PERM1Q5SV97 790 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 LIPMQ5VYY2 423 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 LCTLQ6UWM7 567 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 MBOAT1Q6ZNC8 495 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 RAB44Q7Z6P3 723 aaPredicted RBP12.08□□□□□ -0.48
COPB1-208ENST00000532088 PLXDC1Q8IUK5 500 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 PTGR2Q8N8N7 351 aaPredicted RBP12.08□□□□□ -0.48
COPB1-208ENST00000532088 CCDC63Q8NA47 563 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 SREK1Q8WXA9 508 aaKnown RBP12.08□□□□□ -0.48
COPB1-208ENST00000532088 L3HYPDHQ96EM0 354 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 ZDHHC12Q96GR4 267 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 AHCYL2Q96HN2 611 aaKnown RBP12.08□□□□□ -0.48
COPB1-208ENST00000532088 IL17FQ96PD4 163 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 CCDC3Q9BQI4 270 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 TMEM79Q9BSE2 394 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 HAUS8Q9BT25 410 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 CD244Q9BZW8 370 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 LRRN3Q9H3W5 708 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 KCNK9Q9NPC2 374 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 OXSMQ9NWU1 459 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 HRASLS2Q9NWW9 162 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 NKIRAS1Q9NYS0 192 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 GPRC5BQ9NZH0 403 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 OGFRQ9NZT2 677 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 SEMA5BQ9P283 1151 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 CPSF2Q9P2I0 782 aaKnown RBP12.08□□□□□ -0.48
COPB1-208ENST00000532088 SLC17A7Q9P2U7 560 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 PLAGL1Q9UM63 463 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 KLK4Q9Y5K2 254 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 MN1Q10571 1320 aaPredicted RBP12.08□□□□□ -0.48
COPB1-208ENST00000532088 OR6C74A6NCV1 312 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 NCF1BA6NI72 391 aaPredicted RBP12.07□□□□□ -0.48
COPB1-208ENST00000532088 NCF1CA8MVU1 366 aaPredicted RBP12.07□□□□□ -0.48
COPB1-208ENST00000532088 K7EPI3 171 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 BTN3A3O00478 584 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 NTN3O00634 580 aaPredicted RBP12.07□□□□□ -0.48
COPB1-208ENST00000532088 TOX3O15405 576 aaPredicted RBP12.07□□□□□ -0.48
COPB1-208ENST00000532088 DLX3O60479 287 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 H2AFYO75367 372 aaKnown RBP12.07□□□□□ -0.48
COPB1-208ENST00000532088 RFPL3O75679 317 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 C9P02748 559 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 RPS17P08708 135 aaKnown RBP12.07□□□□□ -0.48
COPB1-208ENST00000532088 CEACAM1P13688 526 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 NCF1P14598 390 aaPredicted RBP12.07□□□□□ -0.48
COPB1-208ENST00000532088 IMPDH1P20839 514 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 HRH2P25021 359 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 OR1D5P58170 312 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 TBPL1P62380 186 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 HERVK_113P63132 956 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 NAE1Q13564 534 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 FASTKQ14296 549 aaKnown RBP12.07□□□□□ -0.48
COPB1-208ENST00000532088 PCLAFQ15004 111 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 TRIP6Q15654 476 aaKnown RBP12.07□□□□□ -0.48
COPB1-208ENST00000532088 PFKFB4Q16877 469 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 ZXDCQ2QGD7 858 aaPredicted RBP12.07□□□□□ -0.48
COPB1-208ENST00000532088 PTCHD3Q3KNS1 767 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 ARMC6Q6NXE6 501 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 HOMEZQ8IX15 550 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 KIAA2013Q8IYS2 634 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 ARFGAP2Q8N6H7 521 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 LMNTD1Q8N9Z9 388 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 FLVCR1-AS1Q8TAF5 88 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 EXT2Q93063 718 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 ERVK-6Q9BXR3 956 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 CHRNA10Q9GZZ6 450 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 XKR8Q9H6D3 395 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 ACTR10Q9NZ32 417 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 PDP2Q9P2J9 529 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 ANKMY1Q9P2S6 941 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 POMT2Q9UKY4 750 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 ZNF232Q9UNY5 417 aa12.07□□□□□ -0.48
COPB1-208ENST00000532088 A0A1W2PQM1 296 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 H3BQF6 201 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 TRIM13O60858 407 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 KATNA1O75449 491 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 SNUPNO95149 360 aaKnown RBP12.06□□□□□ -0.48
COPB1-208ENST00000532088 CPNE6O95741 557 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 BPGMP07738 259 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 MYF5P13349 255 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 NR1D1P20393 614 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 ALDH4A1P30038 563 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 PEBP1P30086 187 aaKnown RBP12.06□□□□□ -0.48
COPB1-208ENST00000532088 SERPINB5P36952 375 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 SERPINB4P48594 390 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 HSPA7P48741 367 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 RELAQ04206 551 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 PRDX1Q06830 199 aaKnown RBP12.06□□□□□ -0.48
COPB1-208ENST00000532088 MPP2Q14168 576 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 E2F2Q14209 437 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 ZNF678Q5SXM1 525 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 PRAMEF13Q5VWM6 474 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 TMEM71Q6P5X7 295 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 SPESP1Q6UW49 350 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 THOC6Q86W42 341 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms