RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 NDST3O95803 873 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 RAF1P04049 648 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 TPOP07202 933 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 ZGLP1P0C6A0 271 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 EPXP11678 715 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 ZNF24P17028 368 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 NFKB1P19838 968 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 SHMT2P34897 504 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 ARSEP51690 589 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 GBE1Q04446 702 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 PRKG2Q13237 762 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 GRM7Q14831 915 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 SLC14A2Q15849 920 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 BOLA3Q53S33 107 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 YOD1Q5VVQ6 348 aaPredicted RBP7.81□□□□□ -1.16
CD44-232ENST00000531118 CDC20BQ86Y33 519 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 CFAP206Q8IYR0 622 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 BEST3Q8N1M1 668 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 CPSF7Q8N684 471 aaKnown RBP7.81□□□□□ -1.16
CD44-232ENST00000531118 AMER2Q8N7J2 671 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 ACRBPQ8NEB7 543 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 FAM57AQ8TBR7 257 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 EDARADDQ8WWZ3 215 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 TADA1Q96BN2 335 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 PWWP2AQ96N64 755 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 SIGLEC12Q96PQ1 595 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 SRPK1Q96SB4 655 aaKnown RBP7.81□□□□□ -1.16
CD44-232ENST00000531118 CEP41Q9BYV8 373 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 RASSF1Q9NS23 344 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 IL17CQ9P0M4 197 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 ZNF282Q9UDV7 671 aaPredicted RBP7.81□□□□□ -1.16
CD44-232ENST00000531118 EDARQ9UNE0 448 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 SCINQ9Y6U3 715 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 IGLV3-12A0A075B6K2 115 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 ELOA3CA0A087WX78 387 aaPredicted RBP7.8□□□□□ -1.16
CD44-232ENST00000531118 ELOA3DA6NLF2 546 aaPredicted RBP7.8□□□□□ -1.16
CD44-232ENST00000531118 INAFM1C9JVW0 142 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 MED26O95402 600 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 CXCR2P25025 360 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 EEF1DP29692 281 aaKnown RBP7.8□□□□□ -1.16
CD44-232ENST00000531118 HOXC12P31275 282 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 PTGER1P34995 402 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 AP2B1P63010 937 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 OCA2Q04671 838 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 TUBA3CQ13748 450 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 DPYSL3Q14195 570 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 OR1C1Q15619 314 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 ELOA3BQ3SY89 546 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 ZNF658BQ4V348 819 aaPredicted RBP7.8□□□□□ -1.16
CD44-232ENST00000531118 CCDC122Q5T0U0 273 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 PPP1R2P3Q6NXS1 205 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 TUBA3EQ6PEY2 450 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 KDELC1Q6UW63 502 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 UNC5AQ6ZN44 842 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 GLT6D1Q7Z4J2 308 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 CCDC71Q8IV32 467 aaPredicted RBP7.8□□□□□ -1.16
CD44-232ENST00000531118 PHC2Q8IXK0 858 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 CLYBLQ8N0X4 340 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 RPRMLQ8N4K4 120 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 TMEM178AQ8NBL3 297 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 FAM98AQ8NCA5 519 aaKnown RBP7.8□□□□□ -1.16
CD44-232ENST00000531118 PHC3Q8NDX5 983 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 ELOA3Q8NG57 546 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 OR5AR1Q8NGP9 310 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 SEC16BQ96JE7 1060 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 ZNF285Q96NJ3 590 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 SYT11Q9BT88 431 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 TRABDQ9H4I3 376 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 DMRT3Q9NQL9 472 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 C14orf105Q9NVL8 296 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.8□□□□□ -1.16
CD44-232ENST00000531118 IL1RAPL1Q9NZN1 696 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 TEKT2Q9UIF3 430 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 MKL2Q9ULH7 1088 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 KLHL20Q9Y2M5 609 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 MPDZO75970 2070 aa7.8□□□□□ -1.16
CD44-232ENST00000531118 CUBNO60494 3623 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 LOC102723996A0A087X1L8 192 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 FITM1A5D6W6 292 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 IDSB3KWA1 339 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 RASGRF2O14827 1237 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 BUD23O43709 281 aaKnown RBP7.79□□□□□ -1.16
CD44-232ENST00000531118 FBLP22087 321 aaKnown RBP7.79□□□□□ -1.16
CD44-232ENST00000531118 PDHA2P29803 388 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 CD151P48509 253 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 DLX5P56178 289 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 PPP2R2BQ00005 443 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 PPIDQ08752 370 aaKnown RBP7.79□□□□□ -1.16
CD44-232ENST00000531118 TCTE1Q5JU00 501 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 TMEM211Q6ICI0 200 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 GALNTL5Q7Z4T8 443 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 MCATQ8IVS2 390 aaKnown RBP7.79□□□□□ -1.16
CD44-232ENST00000531118 CCNYQ8ND76 341 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 GOT1L1Q8NHS2 421 aaPredicted RBP7.79□□□□□ -1.16
CD44-232ENST00000531118 SPATA22Q8NHS9 363 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 FAM71BQ8TC56 605 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 RND1Q92730 232 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 TFGQ92734 400 aaPredicted RBP7.79□□□□□ -1.16
CD44-232ENST00000531118 ZNF830Q96NB3 372 aaPredicted RBP7.79□□□□□ -1.16
CD44-232ENST00000531118 SELENOSQ9BQE4 189 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms