RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.46□□□□□ -2.02
NUP98-218ENST00000530516 NUDT4Q9NZJ9 180 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 THEGQ9P2T0 379 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 WDR83OSQ9Y284 106 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 KPNA7A9QM74 516 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 ARPC2O15144 300 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 SRSF10O75494 262 aaKnown RBP2.45□□□□□ -2.02
NUP98-218ENST00000530516 TRIM49P0CI25 452 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 TRIM49CP0CI26 452 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 SLC2A2P11168 524 aaPredicted RBP2.45□□□□□ -2.02
NUP98-218ENST00000530516 MTHFRP42898 656 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 MATR3P43243 847 aaKnown RBP eCLIP2.45□□□□□ -2.02
NUP98-218ENST00000530516 LBX1P52954 281 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 HUNKP57058 714 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 ZNF74Q16587 644 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 VWC2Q2TAL6 325 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 GPR33Q49SQ1 333 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 MCMDC2Q4G0Z9 681 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 WLSQ5T9L3 541 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 C6orf163Q5TEZ5 329 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 GARNL3Q5VVW2 1013 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 LEKR1Q6ZMV7 388 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 G2E3Q7L622 706 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 ERC1Q8IUD2 1116 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 KLHDC1Q8N7A1 406 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 SYT2Q8N9I0 419 aaPredicted RBP2.45□□□□□ -2.02
NUP98-218ENST00000530516 THOC1Q96FV9 657 aaKnown RBP2.45□□□□□ -2.02
NUP98-218ENST00000530516 LINC00615Q96LM1 132 aaPredicted RBP2.45□□□□□ -2.02
NUP98-218ENST00000530516 CHMP4AQ9BY43 222 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 CCDC68Q9H2F9 335 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 NOL11Q9H8H0 719 aaKnown RBP2.45□□□□□ -2.02
NUP98-218ENST00000530516 CNOT10Q9H9A5 744 aaKnown RBP2.45□□□□□ -2.02
NUP98-218ENST00000530516 CHORDC1Q9UHD1 332 aaPredicted RBP2.45□□□□□ -2.02
NUP98-218ENST00000530516 ANAPC2Q9UJX6 822 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 TP53TG3Q9ULZ0 132 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 MAGED1Q9Y5V3 778 aaPredicted RBP2.45□□□□□ -2.02
NUP98-218ENST00000530516 RPS6KL1Q9Y6S9 549 aa2.45□□□□□ -2.02
NUP98-218ENST00000530516 TRBV5-5A0A0J9YX44 114 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 CASTOR2A6NHX0 329 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 SNURFLB1AK76 121 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 PI4K2BG5E9Z4 385 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 O00370 1275 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 EPHB6O15197 1021 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 IDH3BO43837 385 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 NR2F1P10589 423 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 ACADSP16219 412 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 CD22P20273 847 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 PRKACGP22612 351 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 LHCGRP22888 699 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 CCR10P46092 362 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 LHX1P48742 406 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 LIG4P49917 911 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 XGP55808 180 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 CLDN15P56746 228 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 IFI35P80217 286 aaPredicted RBP2.44□□□□□ -2.02
NUP98-218ENST00000530516 CYCSP99999 105 aaKnown RBP2.44□□□□□ -2.02
NUP98-218ENST00000530516 COX10Q12887 443 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 ELAVL2Q12926 359 aaKnown RBP2.44□□□□□ -2.02
NUP98-218ENST00000530516 VEZF1Q14119 521 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 FASTKD3Q14CZ7 662 aaKnown RBP2.44□□□□□ -2.02
NUP98-218ENST00000530516 EFTUD2Q15029 972 aaKnown RBP eCLIP2.44□□□□□ -2.02
NUP98-218ENST00000530516 MOGAT2Q3SYC2 334 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 BMP2KLQ5H9B9 411 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 LCN1P1Q5VSP4 162 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 CAMKMTQ7Z624 323 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 LMNTD2Q8IXW0 634 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 LGI2Q8N0V4 545 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 TC2NQ8N9U0 490 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 Q8NBF4 154 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 AQP11Q8NBQ7 271 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 OR6S1Q8NH40 331 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 MAPK15Q8TD08 544 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 MIPOL1Q8TD10 442 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 TEKT4Q8WW24 435 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 FAM71F1Q96KD3 344 aaPredicted RBP2.44□□□□□ -2.02
NUP98-218ENST00000530516 MUS81Q96NY9 551 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 FOXN4Q96NZ1 517 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 SEPHS2Q99611 448 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 GPATCH1Q9BRR8 931 aaKnown RBP2.44□□□□□ -2.02
NUP98-218ENST00000530516 CCDC106Q9BWC9 280 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 PPANQ9NQ55 473 aaKnown RBP2.44□□□□□ -2.02
NUP98-218ENST00000530516 FAM120CQ9NX05 1096 aaKnown RBP2.44□□□□□ -2.02
NUP98-218ENST00000530516 CPSF2Q9P2I0 782 aaKnown RBP2.44□□□□□ -2.02
NUP98-218ENST00000530516 RPS6KA6Q9UK32 745 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 PPIEQ9UNP9 301 aaKnown RBP2.44□□□□□ -2.02
NUP98-218ENST00000530516 CSNK1G3Q9Y6M4 447 aa2.44□□□□□ -2.02
NUP98-218ENST00000530516 TDRD15B5MCY1 1934 aaKnown RBP2.43□□□□□ -2.02
NUP98-218ENST00000530516 MYH15Q9Y2K3 1946 aa2.43□□□□□ -2.02
NUP98-218ENST00000530516 A0A087WUV0 522 aaPredicted RBP2.43□□□□□ -2.02
NUP98-218ENST00000530516 hCG_1809904A0A1W2PP81 198 aa2.43□□□□□ -2.02
NUP98-218ENST00000530516 A0A1W2PPE2 198 aa2.43□□□□□ -2.02
NUP98-218ENST00000530516 A0A1W2PR64 198 aa2.43□□□□□ -2.02
NUP98-218ENST00000530516 SHISA7A6NL88 538 aa2.43□□□□□ -2.02
NUP98-218ENST00000530516 CCL24O00175 119 aa2.43□□□□□ -2.02
NUP98-218ENST00000530516 PSMD10O75832 226 aa2.43□□□□□ -2.02
NUP98-218ENST00000530516 C22orf31O95567 290 aa2.43□□□□□ -2.02
NUP98-218ENST00000530516 ACSL3O95573 720 aa2.43□□□□□ -2.02
NUP98-218ENST00000530516 CSN3P07498 182 aa2.43□□□□□ -2.02
NUP98-218ENST00000530516 ABCB1P08183 1280 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms