RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 FTH1P02794 183 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 RPS3P23396 243 aaKnown RBP eCLIP8.17□□□□□ -1.1
SSBP3-212ENST00000528930 F8A1P23610 371 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 HTR1EP28566 365 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 STAT5AP42229 794 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 TTPAP49638 278 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 KPNA2P52292 529 aaKnown RBP8.17□□□□□ -1.1
SSBP3-212ENST00000528930 SARNPP82979 210 aaKnown RBP8.17□□□□□ -1.1
SSBP3-212ENST00000528930 BRD3Q15059 726 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 ARMC3Q5W041 872 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 TMEM198Q66K66 360 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 KIAA0930Q6ICG6 404 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-212ENST00000528930 CEACAM20Q6UY09 585 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 TMEM135Q86UB9 458 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 OOSP2Q86WS3 158 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 HPS6Q86YV9 775 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 VRK3Q8IV63 474 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 RBMXL3Q8N7X1 1067 aaKnown RBP8.17□□□□□ -1.1
SSBP3-212ENST00000528930 ACVR1CQ8NER5 493 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 OR52E1Q8NGJ3 308 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 GRK7Q8WTQ7 553 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 UBXN4Q92575 508 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 SLCO2A1Q92959 643 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 SIGLEC10Q96LC7 697 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 PPM1MQ96MI6 270 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 TEFMQ96QE5 360 aaKnown RBP8.17□□□□□ -1.1
SSBP3-212ENST00000528930 FOXC2Q99958 501 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 ZPBPQ9BS86 351 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 TWSG1Q9GZX9 223 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 MVB12BQ9H7P6 319 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 PCYOX1Q9UHG3 505 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 TMEM184BQ9Y519 407 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-212ENST00000528930 GOLGA6L10A0A0M3HER8 536 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 ZCWPW2A0A1B0GU75 182 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 FAM237BA0A1B0GVD1 139 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 MAGEB16A2A368 324 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 TLCD2A6NGC4 264 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 SDR42E2A6NKP2 422 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 BTN3A1O00481 513 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 CDK2AP1O14519 115 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 STK17BO94768 372 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 DLGAP3O95886 979 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 ALBP02768 609 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 FGF5P12034 268 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 FOLR1P15328 257 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 ZNF28P17035 718 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 POLR2CP19387 275 aaPredicted RBP8.16□□□□□ -1.1
SSBP3-212ENST00000528930 IVDP26440 423 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 AOAHP28039 575 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 PPARGP37231 505 aaPredicted RBP8.16□□□□□ -1.1
SSBP3-212ENST00000528930 CSE1LP55060 971 aaKnown RBP8.16□□□□□ -1.1
SSBP3-212ENST00000528930 PLOD1Q02809 727 aaPredicted RBP8.16□□□□□ -1.1
SSBP3-212ENST00000528930 FOXM1Q08050 763 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 GPS2Q13227 327 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 PRKG2Q13237 762 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 PTK6Q13882 451 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 KRT33BQ14525 404 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 IL11RAQ14626 422 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 TYSND1Q2T9J0 566 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 ANKRD20A4Q4UJ75 823 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 VWA2Q5GFL6 755 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 CRB2Q5IJ48 1285 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 AARS2Q5JTZ9 985 aaKnown RBP8.16□□□□□ -1.1
SSBP3-212ENST00000528930 CTSL3PQ5NE16 218 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 RNASEH2BQ5TBB1 312 aaKnown RBP8.16□□□□□ -1.1
SSBP3-212ENST00000528930 ZNF449Q6P9G9 518 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 FBXO38Q6PIJ6 1188 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 Q71RC1 249 aaPredicted RBP8.16□□□□□ -1.1
SSBP3-212ENST00000528930 SLC22A15Q8IZD6 547 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 ADGRF3Q8IZF5 1079 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 IQCKQ8N0W5 287 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 OR5AR1Q8NGP9 310 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 OR5K2Q8NHB8 316 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 LCN9Q8WX39 176 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 CAPZA3Q96KX2 299 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 BIRC8Q96P09 236 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 OR6C1Q96RD1 312 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 CD180Q99467 661 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 SLC30A3Q99726 388 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 NAPGQ99747 312 aaPredicted RBP8.16□□□□□ -1.1
SSBP3-212ENST00000528930 XAB2Q9HCS7 855 aaKnown RBP8.16□□□□□ -1.1
SSBP3-212ENST00000528930 POMT2Q9UKY4 750 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 ZNF451Q9Y4E5 1061 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 SAR1BQ9Y6B6 198 aa8.16□□□□□ -1.1
SSBP3-212ENST00000528930 UBA6A0AVT1 1052 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 F8W8V4 182 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 E2F3O00716 465 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 DNALI1O14645 258 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 NDUFS3O75489 264 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 SPAG6O75602 509 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 SLCO2B1O94956 709 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 TIAF1O95411 115 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 ZBTB11O95625 1053 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 RECKO95980 971 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 EBLN1P0CF75 366 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 OGNP20774 298 aaKnown RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 PRDX3P30048 256 aaKnown RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 ADARP55265 1226 aaKnown RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 HSD11B2P80365 405 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 HSPA14Q0VDF9 509 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms