RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 PRICKLE3O43900 615 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-215ENST00000528396 ITGB2P05107 769 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 EIF2S1P05198 315 aaKnown RBP12.85□□□□□ -0.35
CAPN1-215ENST00000528396 ZNF37AP17032 561 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-215ENST00000528396 WT1P19544 449 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-215ENST00000528396 CCND1P24385 295 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 IMPA1P29218 277 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 AP1S2P56377 157 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 TAS2R39P59534 338 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 GPX6P59796 221 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 CYP4F2P78329 520 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 ABATP80404 500 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 TAP2Q03519 686 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 GPS2Q13227 327 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 NAB1Q13506 487 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 SLMAPQ14BN4 828 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 KBTBD12Q3ZCT8 623 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 GRTP1Q5TC63 336 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 ICE2Q659A1 982 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 FCRL6Q6DN72 434 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 AGTRAPQ6RW13 159 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 ATL1Q8WXF7 558 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 LRFN5Q96NI6 719 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 CATSPER2Q96P56 530 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 RBBP8Q99708 897 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 GPR87Q9BY21 358 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 TWSG1Q9GZX9 223 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 CHST8Q9H2A9 424 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 POPDC3Q9HBV1 291 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 SMYD2Q9NRG4 433 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 ZDHHC18Q9NUE0 388 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 STOX2Q9P2F5 926 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-215ENST00000528396 ANKMY1Q9P2S6 941 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 GPN3Q9UHW5 284 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-215ENST00000528396 DMGDHQ9UI17 866 aaKnown RBP12.85□□□□□ -0.35
CAPN1-215ENST00000528396 SNX7Q9UNH6 387 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 MTO1Q9Y2Z2 717 aaKnown RBP12.85□□□□□ -0.35
CAPN1-215ENST00000528396 SPTBP11277 2137 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 A0A0J9YVX5 310 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 A0A1W2PPV9 198 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 CXorf49A8MYA2 514 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 NKX2-8O15522 239 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 SRPX2O60687 465 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 SNRNP200O75643 2136 aaKnown RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 GUCA1CO95843 209 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 ENO2P09104 434 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 STMN1P16949 149 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 ALAS2P22557 587 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 PGGT1BP53609 377 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 ARSFP54793 590 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 VSX2P58304 361 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 TBPL1P62380 186 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 PRDX1Q06830 199 aaKnown RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 CDC20Q12834 499 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 ZNF460Q14592 562 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 GRM7Q14831 915 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 UAP1Q16222 522 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 PTCHD3Q3KNS1 767 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 C1orf189Q5VU69 101 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 PRAMEF13Q5VWM6 474 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 CAPN13Q6MZZ7 669 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 MBOAT1Q6ZNC8 495 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 RAPH1Q70E73 1250 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 IFT20Q8IY31 132 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 DSELQ8IZU8 1212 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 SLC38A9Q8NBW4 561 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 EXTL1Q92935 676 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 RERGQ96A58 199 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 MRRFQ96E11 262 aaKnown RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 PDLIM5Q96HC4 596 aaKnown RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 CYTH2Q99418 400 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 EGFL8Q99944 293 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 ATG10Q9H0Y0 220 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 ACTL8Q9H568 366 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 CAB39LQ9H9S4 337 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 PCMTD2Q9NV79 361 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 CTNNAL1Q9UBT7 734 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 PADI2Q9Y2J8 665 aa12.84□□□□□ -0.35
CAPN1-215ENST00000528396 MRPS18BQ9Y676 258 aaKnown RBP12.84□□□□□ -0.35
CAPN1-215ENST00000528396 CDC14CA4D256 554 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 NPEPPSL1A6NEC2 478 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 HCRTR1O43613 425 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 TSPAN12O95859 305 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 RHOXF2BP0C7M4 288 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 HRH2P25021 359 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 PTPN4P29074 926 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 GABRA4P48169 554 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 DCDP81605 110 aaKnown RBP12.83□□□□□ -0.36
CAPN1-215ENST00000528396 NAE1Q13564 534 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 ERV3-1Q14264 604 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 PHKG1Q16816 387 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 FAM214AQ32MH5 1076 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 YOD1Q5VVQ6 348 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-215ENST00000528396 RHBDD2Q6NTF9 364 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 BORAQ6PGQ7 559 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 TTLL10Q6ZVT0 673 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 ADAMTSL2Q86TH1 951 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 C17orf64Q86WR6 236 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 CEP97Q8IW35 865 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 PROKR1Q8TCW9 393 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms