RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 PSMB5P28074 263 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 CDKN2DP55273 166 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 IL2P60568 153 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 RPS18P62269 152 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 ABATP80404 500 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 CAV1Q03135 178 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 C2orf54Q08AI8 447 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 SP140Q13342 867 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 HECTD2Q5U5R9 776 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 ICE2Q659A1 982 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 FAM45BPQ6NSW5 357 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 FBXO42Q6P3S6 717 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 SUSD1Q6UWL2 747 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 CYS1Q717R9 158 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 RNF44Q7L0R7 432 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 PIWIL4Q7Z3Z4 852 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 SLC26A11Q86WA9 606 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 LRRC56Q8IYG6 542 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZBED8Q8IZ13 594 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 MYO1HQ8N1T3 1032 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 TTC29Q8NA56 475 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 FAM45AQ8TCE6 357 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 ADAMTS17Q8TE56 1095 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 PYROXD1Q8WU10 500 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 PDLIM5Q96HC4 596 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 CCDC138Q96M89 665 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 SELENOSQ9BQE4 189 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 DPH7Q9BTV6 452 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 PHACTR1Q9C0D0 580 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 RAB17Q9H0T7 212 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 PARVBQ9HBI1 364 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 MRPS30Q9NP92 439 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZFATQ9P243 1243 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 GPN3Q9UHW5 284 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 MAN2B2Q9Y2E5 1009 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 UTP11Q9Y3A2 253 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 ATRXP46100 2492 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 A0A1B0GX78 115 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 DSCR3O14972 297 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 KLF7O75840 302 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 SYF2O95926 243 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 TUBB4AP04350 444 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 HRH2P25021 359 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 IMPA1P29218 277 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 PMS2P54278 862 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 EMP3P54852 163 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 MRPS25P82663 173 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 CKAP4Q07065 602 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 NFATC3Q12968 1075 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 IL10RAQ13651 578 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 SSPNQ14714 243 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 FASTKD3Q14CZ7 662 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 NKAIN1Q4KMZ8 207 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 WASHC2DQ5SRD0 308 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZNF425Q6IV72 752 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 MRPL14Q6P1L8 145 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 GPATCH11Q8N954 259 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 ANKRD7Q92527 254 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 ABHD17AQ96GS6 310 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 IP6K3Q96PC2 410 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZFYVE21Q9BQ24 234 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 PLCD4Q9BRC7 762 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 ACAT2Q9BWD1 397 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 PCBD2Q9H0N5 130 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 DPH5Q9H2P9 285 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 CUTCQ9NTM9 273 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 GRHL1Q9NZI5 618 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 IFT80Q9P2H3 777 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 DHCR7Q9UBM7 475 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 TAC3Q9UHF0 121 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 CDC23Q9UJX2 597 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 PDE10AQ9Y233 779 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 MED13Q9UHV7 2174 aa11.6□□□□□ -0.55
TRAPPC4-209ENST00000528230 A0A0J9YVX5 310 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 MKRN2OSH3BPM6 223 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 RFPL1O75677 317 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 TSPAN12O95859 305 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 ALBP02768 609 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 GSTA2P09210 222 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 HIST1H2AGP0C0S8 130 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 HIST1H2ADP20671 130 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 ALAS2P22557 587 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 CCND1P24385 295 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 VSX2P58304 361 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 YBX1P67809 324 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 C1orf189Q5VU69 101 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 MLIPQ5VWP3 458 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 TCTN3Q6NUS6 607 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 TTLL10Q6ZVT0 673 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 STRA8Q7Z7C7 330 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZC3HC1Q86WB0 502 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 PAQR7Q86WK9 346 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 RAB43Q86YS6 212 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 PPFIBP2Q8ND30 876 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 C9orf43Q8TAL5 461 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 FKBP10Q96AY3 582 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 NACC2Q96BF6 587 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 PTERQ96BW5 349 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 LINGO1Q96FE5 620 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms