RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 IP6K3Q96PC2 410 aa31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 ACAT2Q9BWD1 397 aa31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 ZNF71Q9NQZ8 489 aaPredicted RBP31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 NDOR1Q9UHB4 597 aa31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 DSCR3O14972 297 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 MCM3P25205 808 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 ETF1P62495 437 aaKnown RBP31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 RELAQ04206 551 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 FAM214AQ32MH5 1076 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 MLIPQ5VWP3 458 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 SUSD1Q6UWL2 747 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 UBE2R2Q712K3 238 aaPredicted RBP31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 OR2Y1Q8NGV0 311 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 ZFYVE21Q9BQ24 234 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 PLCD4Q9BRC7 762 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 TRIM55Q9BYV6 548 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 TRIM31Q9BZY9 425 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 ING2Q9H160 280 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 SLC6A20Q9NP91 592 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 MRPS30Q9NP92 439 aaKnown RBP31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 PPANQ9NQ55 473 aaKnown RBP31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 CUTCQ9NTM9 273 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 UTP6Q9NYH9 597 aaKnown RBP31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 TP53TG5Q9Y2B4 290 aa31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 PCDHGA9Q9Y5G4 932 aaKnown RBP31.64■■■□□ 2.66
SSSCA1-205ENST00000527920 FAM187AA6NFU0 413 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 C8GP07360 202 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 PIM1P11309 404 aaPredicted RBP31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 RPL21P46778 160 aaKnown RBP31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 ABATP80404 500 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 SP140Q13342 867 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 SSPNQ14714 243 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 RBM20Q5T481 1227 aaKnown RBP31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 FAM69BQ5VUD6 431 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 ICE2Q659A1 982 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 TTLL10Q6ZVT0 673 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 LRRC56Q8IYG6 542 aaPredicted RBP31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 TMEM102Q8N9M5 508 aaPredicted RBP31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 SPATA4Q8NEY3 305 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 ACSS2Q9NR19 701 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 SLC22A11Q9NSA0 550 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 TAC3Q9UHF0 121 aa31.63■■■□□ 2.65
SSSCA1-205ENST00000527920 ARGFXA6NJG6 315 aa31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 ALAS2P22557 587 aa31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 FOLR3P41439 243 aa31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 CDKN2DP55273 166 aa31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 VSX2P58304 361 aaPredicted RBP31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 WASHC2DQ5SRD0 308 aa31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 HP1BP3Q5SSJ5 553 aaPredicted RBP31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 CPZQ66K79 652 aa31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 TRMT10BQ6PF06 316 aaKnown RBP31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 MED25Q71SY5 747 aa31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 MAATS1Q7Z4T9 603 aa31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 PTRH1Q86Y79 214 aaKnown RBP31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 EEF1AKMT1Q8WVE0 214 aa31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 PTRH2Q9Y3E5 179 aaKnown RBP31.62■■■□□ 2.65
SSSCA1-205ENST00000527920 IGKV1-8A0A0C4DH67 115 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 SLC16A5O15375 505 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 DNAJB5O75953 348 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 SYF2O95926 243 aaKnown RBP31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 ALBP02768 609 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 ITGAXP20702 1163 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 IMPA1P29218 277 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 EMP3P54852 163 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 RRADP55042 308 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 YBX1P67809 324 aaKnown RBP31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 FRMPD2BQ6IN97 320 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 ZNF425Q6IV72 752 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 PAQR3Q6TCH7 311 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 PAQR7Q86WK9 346 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 SPNS2Q8IVW8 549 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 MCOLN3Q8TDD5 553 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 NACC2Q96BF6 587 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 SLC26A1Q9H2B4 701 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 WDR54Q9H977 334 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 MLXIPLQ9NP71 852 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 SNX24Q9Y343 169 aa31.61■■■□□ 2.65
SSSCA1-205ENST00000527920 A0A0J9YVX5 310 aa31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 NRP2O60462 931 aa31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 CNOT3O75175 753 aaKnown RBP31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 CASQ1P31415 396 aa31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 PDIA2Q13087 525 aaKnown RBP31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 FBXO42Q6P3S6 717 aa31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 MYO1HQ8N1T3 1032 aa31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 PTERQ96BW5 349 aa31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 CCDC138Q96M89 665 aa31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 ERP44Q9BS26 406 aa31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 WHRNQ9P202 907 aa31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 SLC17A6Q9P2U8 582 aa31.6■■■□□ 2.65
SSSCA1-205ENST00000527920 CEACAM4O75871 244 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 EZRP15311 586 aaKnown RBP31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 CASRP41180 1078 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 MGAT5Q09328 741 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 TSTA3Q13630 321 aaPredicted RBP31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 ASB18Q6ZVZ8 466 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 OVCH1Q7RTY7 1134 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 MRGPREQ86SM8 312 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 PALM2Q8IXS6 379 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 PPFIBP2Q8ND30 876 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 FBXO36Q8NEA4 188 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms