RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 HEXBP07686 556 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 UQCRHP07919 91 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 HOXB4P17483 251 aaPredicted RBP11.69□□□□□ -0.54
SRPRA-202ENST00000527817 EEF1A2Q05639 463 aaKnown RBP11.69□□□□□ -0.54
SRPRA-202ENST00000527817 SPARCL1Q14515 664 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 PCOLCEQ15113 449 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 FBXO42Q6P3S6 717 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 TMEM205Q6UW68 189 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 UNC5DQ6UXZ4 953 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 MEX3BQ6ZN04 569 aaKnown RBP11.69□□□□□ -0.54
SRPRA-202ENST00000527817 ARHGEF18Q6ZSZ5 1173 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 DCUN1D3Q8IWE4 304 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 OR4N4Q8N0Y3 316 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 OR8K1Q8NGG5 319 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 PHF10Q8WUB8 498 aaKnown RBP11.69□□□□□ -0.54
SRPRA-202ENST00000527817 ASZ1Q8WWH4 475 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 MVB12AQ96EY5 273 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 IL17FQ96PD4 163 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 C14orf105Q9NVL8 296 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 IMPACTQ9P2X3 320 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 SLC39A10Q9ULF5 831 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 ALG6Q9Y672 507 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 FAM169AQ9Y6X4 670 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 ACANP16112 2415 aa11.69□□□□□ -0.54
SRPRA-202ENST00000527817 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
SRPRA-202ENST00000527817 A0A0J9YVX5 310 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 FAM221AA4D161 298 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 MROH6A6NGR9 719 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 TTI1O43156 1089 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 PRPF4O43172 522 aaKnown RBP eCLIP11.68□□□□□ -0.54
SRPRA-202ENST00000527817 STK10O94804 968 aaKnown RBP11.68□□□□□ -0.54
SRPRA-202ENST00000527817 MBD3O95983 291 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 TPH1P17752 444 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 MSNP26038 577 aaKnown RBP11.68□□□□□ -0.54
SRPRA-202ENST00000527817 CCR7P32248 378 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 FOXN2P32314 431 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 SLC26A3P40879 764 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 PMP22Q01453 160 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 DSG2Q14126 1118 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 PRTGQ2VWP7 1150 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 KCTD11Q693B1 232 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 H3F3CQ6NXT2 135 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 TAX1BP1Q86VP1 789 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 VRK3Q8IV63 474 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.68□□□□□ -0.54
SRPRA-202ENST00000527817 CFAP61Q8NHU2 1237 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 ZNF354BQ96LW1 612 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 C10orf90Q96M02 699 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 SPATA13Q96N96 652 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 ALS2CR12Q96Q35 445 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 DNAJC7Q99615 494 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 TUBB6Q9BUF5 446 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 CARD6Q9BX69 1037 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 RAB11FIP5Q9BXF6 653 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 HEMGNQ9BXL5 484 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 MKKSQ9NPJ1 570 aaPredicted RBP11.68□□□□□ -0.54
SRPRA-202ENST00000527817 STOX2Q9P2F5 926 aaPredicted RBP11.68□□□□□ -0.54
SRPRA-202ENST00000527817 TRPC4Q9UBN4 977 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 INTUQ9ULD6 942 aa11.68□□□□□ -0.54
SRPRA-202ENST00000527817 ABCA4P78363 2273 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 INTS1Q8N201 2190 aaKnown RBP11.67□□□□□ -0.54
SRPRA-202ENST00000527817 ASPDHA6ND91 283 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 E9PLN8 166 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 ASNA1O43681 348 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 OR1I1O60431 355 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 SLCO2B1O94956 709 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 EIF2S1P05198 315 aaKnown RBP11.67□□□□□ -0.54
SRPRA-202ENST00000527817 CD99P14209 185 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 ART1P52961 327 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 CSE1LP55060 971 aaKnown RBP11.67□□□□□ -0.54
SRPRA-202ENST00000527817 COPS2P61201 443 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 TPM4P67936 248 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 ALDH6A1Q02252 535 aaKnown RBP11.67□□□□□ -0.54
SRPRA-202ENST00000527817 ZNF33BQ06732 778 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 HSPA14Q0VDF9 509 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 TTC23LQ6PF05 361 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 RNF44Q7L0R7 432 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 DOLPP1Q86YN1 238 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 CCDC50Q8IVM0 306 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 CDKL3Q8IVW4 592 aaPredicted RBP11.67□□□□□ -0.54
SRPRA-202ENST00000527817 OR2L3Q8NG85 312 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 HMGCLL1Q8TB92 370 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 ACTL9Q8TC94 416 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 RAD51AP1Q96B01 352 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 GBP4Q96PP9 640 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 DMRTA2Q96SC8 542 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 TTC1Q99614 292 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 VKORC1Q9BQB6 163 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 YIPF2Q9BWQ6 316 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 ZNHIT6Q9NWK9 470 aaKnown RBP11.67□□□□□ -0.54
SRPRA-202ENST00000527817 CIDEBQ9UHD4 219 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 EFR3BQ9Y2G0 817 aa11.67□□□□□ -0.54
SRPRA-202ENST00000527817 OR2A25A4D2G3 310 aa11.66□□□□□ -0.54
SRPRA-202ENST00000527817 OR51F1A6NGY5 319 aa11.66□□□□□ -0.54
SRPRA-202ENST00000527817 FAM227AF5H4B4 570 aa11.66□□□□□ -0.54
SRPRA-202ENST00000527817 GOLGA6L22H0YM25 854 aa11.66□□□□□ -0.54
SRPRA-202ENST00000527817 NADKO95544 446 aaPredicted RBP11.66□□□□□ -0.54
SRPRA-202ENST00000527817 RBP3P10745 1247 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms