RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 FGF3P11487 239 aaPredicted RBP19.97■□□□□ 0.79
CD44-222ENST00000526025 GRIA3P42263 894 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 CCT5P48643 541 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 SEPHS1P49903 392 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 GABREP78334 506 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 IL11RAQ14626 422 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 PTCHD3Q3KNS1 767 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 KRT71Q3SY84 523 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 THEMIS2Q5TEJ8 643 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 OR8K5Q8NH50 307 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 ZPBPQ9BS86 351 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 DDA1Q9BW61 102 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 MRPS30Q9NP92 439 aaKnown RBP19.97■□□□□ 0.79
CD44-222ENST00000526025 ZNF358Q9NW07 568 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 SOHLH2Q9NX45 425 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 WWOXQ9NZC7 414 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 XPR1Q9UBH6 696 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 PCDHGA3Q9Y5H0 932 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 OR2A25A4D2G3 310 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 SUPT3HB4E1H0 165 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 GOLGA8RI6L899 631 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 UBXN8O00124 270 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 MAP2K7O14733 419 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 SUPT3HO75486 399 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 PVRP15151 417 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 NPPBP16860 134 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 SPINK2P20155 84 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 MAGP20916 626 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 CRHR1P34998 444 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 TSTA3Q13630 321 aaPredicted RBP19.96■□□□□ 0.79
CD44-222ENST00000526025 CASP8Q14790 479 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 ZNF425Q6IV72 752 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 FIGLAQ6QHK4 219 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 C17orf64Q86WR6 236 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 FAM129CQ86XR2 697 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 PKNOX2Q96KN3 472 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 SLC46A1Q96NT5 459 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 TEFMQ96QE5 360 aaKnown RBP19.96■□□□□ 0.79
CD44-222ENST00000526025 TAAR9Q96RI9 348 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 TMEM79Q9BSE2 394 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 ACAT2Q9BWD1 397 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 FANCEQ9HB96 536 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 ENAMQ9NRM1 1142 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 OCIAD1Q9NX40 245 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 SNX7Q9UNH6 387 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 PCDHGA7Q9Y5G6 932 aa19.96■□□□□ 0.79
CD44-222ENST00000526025 TRABD2BA6NFA1 517 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 NCF1BA6NI72 391 aaPredicted RBP19.95■□□□□ 0.78
CD44-222ENST00000526025 NCF1CA8MVU1 366 aaPredicted RBP19.95■□□□□ 0.78
CD44-222ENST00000526025 RGS16O15492 202 aaPredicted RBP19.95■□□□□ 0.78
CD44-222ENST00000526025 TAPBPO15533 448 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 STK16O75716 305 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 CCL4P13236 92 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 NCF1P14598 390 aaPredicted RBP19.95■□□□□ 0.78
CD44-222ENST00000526025 KRT4P19013 534 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 ALDH18A1P54886 795 aaKnown RBP19.95■□□□□ 0.78
CD44-222ENST00000526025 SETDB1Q15047 1291 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 ZIC1Q15915 447 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 TNFAIP8L3Q5GJ75 292 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 CEP85LQ5SZL2 805 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 FCRL6Q6DN72 434 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 LRRC70Q7Z2Q7 622 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 THOC6Q86W42 341 aaKnown RBP19.95■□□□□ 0.78
CD44-222ENST00000526025 TMEM151AQ8N4L1 468 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 ABHD11Q8NFV4 315 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 ALKBH8Q96BT7 664 aaKnown RBP19.95■□□□□ 0.78
CD44-222ENST00000526025 PYCR2Q96C36 320 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 PGM2Q96G03 612 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 SCYL1Q96KG9 808 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 FCRL4Q96PJ5 515 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 OR4K3Q96R72 315 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 PLCD4Q9BRC7 762 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 DPH7Q9BTV6 452 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 CAPS2Q9BXY5 557 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 ASPSCR1Q9BZE9 553 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 SLC6A20Q9NP91 592 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 TMEM184CQ9NVA4 438 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 GPRC5BQ9NZH0 403 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 DKK4Q9UBT3 224 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 PISDQ9UG56 409 aa19.95■□□□□ 0.78
CD44-222ENST00000526025 TNPO3Q9Y5L0 923 aaKnown RBP19.95■□□□□ 0.78
CD44-222ENST00000526025 IGKV1-8A0A0C4DH67 115 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 STX16-NPEPL1H3BU86 382 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 TK2O00142 265 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 STX16O14662 325 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 NVLO15381 856 aaKnown RBP19.94■□□□□ 0.78
CD44-222ENST00000526025 SMIM24O75264 130 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 EBLN1P0CF75 366 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 FGF5P12034 268 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 HGFP14210 728 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 FOLR1P15328 257 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 RBMS1P29558 406 aaKnown RBP19.94■□□□□ 0.78
CD44-222ENST00000526025 GABRA4P48169 554 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 ZC3H12BQ5HYM0 836 aaKnown RBP19.94■□□□□ 0.78
CD44-222ENST00000526025 TMEM164Q5U3C3 297 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 CEACAM20Q6UY09 585 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 CDHR3Q6ZTQ4 885 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 RNF44Q7L0R7 432 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 PAQR7Q86WK9 346 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 DNAJC22Q8N4W6 341 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms