RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-216	ENST00000525997	CCNYL1	Q8N7R7	359 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	LMNTD1	Q8N9Z9	388 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	TTL	Q8NG68	377 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	OR4D9	Q8NGE8	314 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	OR2I1P	Q8NGU4	316 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	MGARP	Q8TDB4	240 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	LRRC8C	Q8TDW0	803 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	DENND1A	Q8TEH3	1009 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	SLC5A11	Q8WWX8	675 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	PATE1	Q8WXA2	126 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	CCT6B	Q92526	530 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	N4BP2L2	Q92802	583 aa	Predicted RBP	5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	ZUFSP	Q96AP4	578 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	THAP11	Q96EK4	314 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	HS3ST6	Q96QI5	342 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	CCT7	Q99832	543 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	AIF1L	Q9BQI0	150 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	CENPK	Q9BS16	269 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	RTKN	Q9BST9	563 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	SGPP1	Q9BX95	441 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	NLN	Q9BYT8	704 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	UNK	Q9C0B0	810 aa	Known RBP	5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	STRADB	Q9C0K7	418 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	ATG10	Q9H0Y0	220 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	SEMA6C	Q9H3T2	930 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	LRRN3	Q9H3W5	708 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	SYNDIG1	Q9H7V2	258 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	ACTR8	Q9H981	624 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	PELI2	Q9HAT8	420 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	FANCE	Q9HB96	536 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	MRPS30	Q9NP92	439 aa	Known RBP	5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	PARD6A	Q9NPB6	346 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	C1GALT1	Q9NS00	363 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	THAP1	Q9NVV9	213 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	OXSM	Q9NWU1	459 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	HRASLS2	Q9NWW9	162 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	SLC17A7	Q9P2U7	560 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	TAC3	Q9UHF0	121 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	ADGRE2	Q9UHX3	823 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	ADAMTS6	Q9UKP5	1117 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	POMT2	Q9UKY4	750 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	EMCN	Q9ULC0	261 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	SNX7	Q9UNH6	387 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	SNX6	Q9UNH7	406 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	PCDHGA10	Q9Y5H3	936 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	ST14	Q9Y5Y6	855 aa		5.07	□□□□□ -1.6
PUM1-216	ENST00000525997	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	MN1	Q10571	1320 aa	Predicted RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	ADAMTS9	Q9P2N4	1935 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	URAD	A6NGE7	173 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	SLC30A4	O14863	429 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	KLF11	O14901	512 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	PPM1D	O15297	605 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	CAPN5	O15484	640 aa	Predicted RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	SH3BP5	O60239	455 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	RASSF9	O75901	435 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	CLDN9	O95484	217 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	ZBTB11	O95625	1053 aa	Predicted RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	TOP3B	O95985	862 aa	Known RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	KRT6A	P02538	564 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	C9	P02748	559 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	KRT6B	P04259	564 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	RPLP0	P05388	317 aa	Known RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	RPS17	P08708	135 aa	Known RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	ANKRD34C	P0C6C1	535 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	CEACAM1	P13688	526 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	EZR	P15311	586 aa	Known RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	CREB1	P16220	341 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	PCSK2	P16519	638 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	UGT2B7	P16662	529 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	TYRP1	P17643	537 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	POLR2C	P19387	275 aa	Predicted RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	TGM1	P22735	817 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	SLC6A12	P48065	614 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	KRT6C	P48668	564 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	ACADVL	P49748	655 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	PGGT1B	P53609	377 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	NAGLU	P54802	743 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	RPS15A	P62244	130 aa	Known RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	IRF8	Q02556	426 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	ACY1	Q03154	408 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	RELA	Q04206	551 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	CLC	Q05315	142 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	PCDH1	Q08174	1060 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	TGM3	Q08188	693 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	IFT88	Q13099	833 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	STX3	Q13277	289 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	EIF3I	Q13347	325 aa	Known RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	RCN2	Q14257	317 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	GRB7	Q14451	532 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	TRIP6	Q15654	476 aa	Known RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	CHI3L2	Q15782	390 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	TBCC	Q15814	346 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	AMZ1	Q400G9	498 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	GGTA1P	Q4G0N0	100 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	ZNF678	Q5SXM1	525 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	ATG9B	Q674R7	924 aa		5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	TTC19	Q6DKK2	380 aa	Predicted RBP	5.06	□□□□□ -1.6
PUM1-216	ENST00000525997	GRHL2	Q6ISB3	625 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms