RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 CSTF2P33240 577 aaKnown RBP eCLIP4.59□□□□□ -1.68
HIPK3-204ENST00000525975 MAP2K3P46734 347 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 BRCC3P46736 316 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 ETV1P50549 477 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 AIF1P55008 147 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 FKBP1AP62942 108 aaKnown RBP4.59□□□□□ -1.68
HIPK3-204ENST00000525975 MBTD1Q05BQ5 628 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 SEMA3BQ13214 749 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 SNTA1Q13424 505 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 ASAH1Q13510 395 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 POU4F3Q15319 338 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 ZNF284Q2VY69 593 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 GTDC1Q4AE62 458 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 SGO1Q5FBB7 561 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 SPANXN4Q5MJ08 99 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 ZNF648Q5T619 568 aaPredicted RBP4.59□□□□□ -1.68
HIPK3-204ENST00000525975 HFE2Q6ZVN8 426 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 ZNF367Q7RTV3 350 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 LUZP2Q86TE4 346 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 ZSWIM9Q86XI8 627 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 RNF130Q86XS8 419 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 ZZZ3Q8IYH5 903 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 DNAJC22Q8N4W6 341 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 CLHC1Q8NHS4 586 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 RHEBL1Q8TAI7 183 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 EDEM1Q92611 657 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 EMID1Q96A84 441 aaPredicted RBP4.59□□□□□ -1.68
HIPK3-204ENST00000525975 NTAN1Q96AB6 310 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 TESCQ96BS2 214 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 TPD52L3Q96J77 140 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 GTPBP2Q9BX10 602 aaKnown RBP4.59□□□□□ -1.68
HIPK3-204ENST00000525975 NXF3Q9H4D5 531 aaKnown RBP4.59□□□□□ -1.68
HIPK3-204ENST00000525975 IKZF5Q9H5V7 419 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 ERVMER34-1Q9H9K5 563 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 IL1RAPQ9NPH3 570 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 ASAH2Q9NR71 780 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 THUMPD1Q9NXG2 353 aaKnown RBP4.59□□□□□ -1.68
HIPK3-204ENST00000525975 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.59□□□□□ -1.68
HIPK3-204ENST00000525975 TAS2R13Q9NYV9 303 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 MARCH4Q9P2E8 410 aaPredicted RBP4.59□□□□□ -1.68
HIPK3-204ENST00000525975 KLK4Q9Y5K2 254 aa4.59□□□□□ -1.68
HIPK3-204ENST00000525975 WDR81Q562E7 1941 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 UBR3Q6ZT12 1888 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 TRAV19A0A0A6YYK7 116 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 HNRNPCL2B2RXH8 293 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 CLDN5O00501 218 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 VPS26AO75436 327 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 S1PR4O95977 384 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 ALPPP05187 535 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 HLA-DQB2P05538 268 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 PRR35P0CG20 571 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 MTHFD2P13995 350 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 ZNF250P15622 560 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 CPN2P22792 545 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 CCNCP24863 283 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 PSMA1P25786 263 aaKnown RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 LMO2P25791 158 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 HLA-DMAP28067 261 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 ZFP36L2P47974 494 aaKnown RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 HCAR3P49019 387 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 CXCR3P49682 368 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 MLLT6P55198 1093 aaPredicted RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 DSTNP60981 165 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 SRP54P61011 504 aaKnown RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 HOXC5Q00444 222 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 RGS1Q08116 209 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 HYAL2Q12891 473 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 TNK1Q13470 666 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 IRF3Q14653 427 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 PTGR1Q14914 329 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 COL19A1Q14993 1142 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 VEPH1Q14D04 833 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 SLC14A2Q15849 920 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 XKR7Q5GH72 579 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 ZBTB37Q5TC79 503 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 ANKRD54Q6NXT1 300 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 Q6ZPB1 254 aaPredicted RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 EIF3MQ7L2H7 374 aaKnown RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 SNX20Q7Z614 316 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 NLRP8Q86W28 1048 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 SLC44A2Q8IWA5 706 aaPredicted RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 RDH10Q8IZV5 341 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 LRRC17Q8N6Y2 441 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 SLC37A3Q8NCC5 494 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 OR4M1Q8NGD0 313 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 VANGL1Q8TAA9 524 aaPredicted RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 C9orf43Q8TAL5 461 aaPredicted RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 ZNF431Q8TF32 576 aaPredicted RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 GGHQ92820 318 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 MARVELD3Q96A59 401 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 SIPA1Q96FS4 1042 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 B3GALT6Q96L58 329 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 PPP3R2Q96LZ3 170 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 TBATAQ96M53 351 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 ATOH8Q96SQ7 321 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 PCYT2Q99447 389 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 GDF15Q99988 308 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 FDXACB1Q9BRP7 624 aaPredicted RBP4.58□□□□□ -1.68
HIPK3-204ENST00000525975 ULBP1Q9BZM6 244 aa4.58□□□□□ -1.68
HIPK3-204ENST00000525975 SRRQ9GZT4 340 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms