RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 PEBP1P30086 187 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 DLSTP36957 453 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 STAT5AP42229 794 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 GRIA3P42263 894 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ARSFP54793 590 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 RPS15P62841 145 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CXADRP78310 365 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CDKL1Q00532 357 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 TIAL1Q01085 375 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 TAP2Q03519 686 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PRDX1Q06830 199 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 VAC14Q08AM6 782 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 NAE1Q13564 534 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 BMPR2Q13873 1038 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 FASTKQ14296 549 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CSHL1Q14406 222 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF460Q14592 562 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 GRM7Q14831 915 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 TSNQ15631 228 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZKSCAN8Q15776 578 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PHKG1Q16816 387 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 TSNAXIP1Q2TAA8 658 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 DEFB110Q30KQ9 67 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 YOD1Q5VVQ6 348 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 KIAA1614Q5VZ46 1190 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 VASH2Q86V25 355 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 DTX1Q86Y01 620 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 MCATQ8IVS2 390 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CEP97Q8IW35 865 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PPFIBP2Q8ND30 876 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 OR2A1Q8NGT9 310 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 OR1L3Q8NH93 324 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 FLVCR1-AS1Q8TAF5 88 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 UHMK1Q8TAS1 419 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 STAG3L4Q8TBR4 150 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PROKR1Q8TCW9 393 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 UBLCP1Q8WVY7 318 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC44A1Q8WWI5 657 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 EXT2Q93063 718 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 MR1Q95460 341 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 NKD1Q969G9 470 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PMEPA1Q969W9 287 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 MTBPQ96DY7 904 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CABS1Q96KC9 395 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 LRFN5Q96NI6 719 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 NRTNQ99748 197 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZFYVE21Q9BQ24 234 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 DPH2Q9BQC3 489 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PLCD4Q9BRC7 762 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 MCMBPQ9BTE3 642 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 DPH7Q9BTV6 452 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CAPS2Q9BXY5 557 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 FUT8Q9BYC5 575 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 FAM117AQ9C073 453 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ATG10Q9H0Y0 220 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 VPS11Q9H270 941 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PPCSQ9HAB8 311 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 SNX15Q9NRS6 342 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 EURLQ9NYK6 297 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 WWOXQ9NZC7 414 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CD274Q9NZQ7 290 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 NDOR1Q9UHB4 597 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 GPN3Q9UHW5 284 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF180Q9UJW8 692 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PILRAQ9UKJ1 303 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PADI2Q9Y2J8 665 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 KLHL20Q9Y2M5 609 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 KCNE2Q9Y6J6 123 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ARHGEF17Q96PE2 2063 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 A0A096LPK6 155 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 A0A0J9YVX5 310 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 A0A1B0GX78 115 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 A0A1W2PPV9 198 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 OR2A25A4D2G3 310 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 NCF1BA6NI72 391 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 NCF1CA8MVU1 366 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 MEN1O00255 615 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 PRICKLE3O43900 615 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 KERAO60938 352 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 H2AFYO75367 372 aaKnown RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 KATNA1O75449 491 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 WDR47O94967 919 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 TIAF1O95411 115 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 C1QAP02745 245 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 NTRK1P04629 796 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 EIF2S1P05198 315 aaKnown RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SNRPAP09012 282 aaKnown RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC35G6P0C7Q6 338 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC35E2BP0CK96 405 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 CDH1P12830 882 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 GFAPP14136 432 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 NCF1P14598 390 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 LIFP15018 202 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF28P17035 718 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 TFEBP19484 476 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 TCN2P20062 427 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 ALAS2P22557 587 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 ITPKBP27987 946 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 DEKP35659 375 aaKnown RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 CCR8P51685 355 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms