RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ATP8B3O60423 1300 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 FRYQ5TBA9 3013 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CFAP46Q8IYW2 2715 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 GOLGA6L7A0A1B0GV03 622 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 MED19A0JLT2 244 aaPredicted RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 PLSCR5A0PG75 271 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 SIGLEC16A6NMB1 481 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 SRRM3A6NNA2 597 aaPredicted RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 EIF3CLB5ME19 914 aaKnown RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 LOC730098B7Z3J9 87 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 PIP5K1BO14986 540 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 IRAK2O43187 625 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 LDB2O43679 373 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 BUB1O43683 1085 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 DAB1O75553 588 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 GAS8-AS1O95177 125 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 LSM8O95777 96 aaKnown RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 PLGP00747 810 aaPredicted RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 IGLV3-27P01718 113 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 HMBSP08397 361 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 IRF1P10914 325 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 GZMAP12544 262 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 LAMP2P13473 410 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 RARGP13631 454 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CDC25CP30307 473 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 MTHFRP42898 656 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 ACADSBP45954 432 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 NSFP46459 744 aaKnown RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 AMTP48728 403 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 TUBP50607 506 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 SGSHP51688 502 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 NUDT6P53370 316 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 PMS2P54278 862 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 HDAC4P56524 1084 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 SLC7A9P82251 487 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 MAMLD1Q13495 774 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 HTR4Q13639 388 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 VEPH1Q14D04 833 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CA9Q16790 459 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CDO1Q16878 200 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 LONRF1Q17RB8 773 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CCDC14Q49A88 953 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 C5orf22Q49AR2 442 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 DCAF6Q58WW2 860 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 FAM78AQ5JUQ0 283 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 BSPRYQ5W0U4 402 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 WBP2NLQ6ICG8 309 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 HEPHL1Q6MZM0 1159 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 H1FNTQ75WM6 255 aaPredicted RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 SLC26A9Q7LBE3 791 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 ITIH5Q86UX2 942 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 MON1AQ86VX9 555 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 ARID3BQ8IVW6 561 aaPredicted RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CMTM8Q8IZV2 173 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM217Q8N7C4 229 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF397Q8NF99 534 aaPredicted RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 DQX1Q8TE96 717 aaKnown RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 RXFP2Q8WXD0 754 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 IRGQQ8WZA9 623 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 USP13Q92995 863 aaPredicted RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 FAM149B1Q96BN6 582 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 C18orf8Q96DM3 657 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 SLC39A13Q96H72 371 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CEP295NLQ96MC4 621 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 MCEEQ96PE7 176 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 DUX5Q96PT3 197 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 FRG2BQ96QU4 278 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 PEBP4Q96S96 227 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 NPY6RQ99463 290 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 BAG1Q99933 345 aaPredicted RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 KXD1Q9BQD3 176 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 DDX23Q9BUQ8 820 aaKnown RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 MECRQ9BV79 373 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 NUP85Q9BW27 656 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 C1QTNF4Q9BXJ3 329 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 PDCL3Q9H2J4 239 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 LINC00597Q9H2U6 94 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 FBXO44Q9H4M3 255 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 DDX31Q9H8H2 851 aaKnown RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 POPDC2Q9HBU9 364 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 TRPC7Q9HCX4 862 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 Q9N2J8 555 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 TLR8Q9NR97 1041 aaKnown RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 ABCC13Q9NSE7 274 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 PIGVQ9NUD9 493 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 COMMD8Q9NX08 183 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CLIC5Q9NZA1 410 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 ADAM22Q9P0K1 906 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 IGSF9Q9P2J2 1179 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 THEGQ9P2T0 379 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CNOT8Q9UFF9 292 aaKnown RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 RASAL2Q9UJF2 1139 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CLEC4EQ9ULY5 219 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 PYCARDQ9ULZ3 195 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 NEU3Q9UQ49 428 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 HYOU1Q9Y4L1 999 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 SNX10Q9Y5X0 201 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 CPQQ9Y646 472 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 MYO9AB2RTY4 2548 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms