RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	KCNK6	Q9Y257	313 aa		4.17	□□□□□ -1.74
PCM1-223	ENST00000524356	TNFSF13B	Q9Y275	285 aa		4.17	□□□□□ -1.74
PCM1-223	ENST00000524356	NCOR1	O75376	2440 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356		A0A1W2PPC1	479 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	TARSL2	A2RTX5	802 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	GMFG	O60234	142 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	SERPINC1	P01008	464 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	ACTN1	P12814	892 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	SLC2A4	P14672	509 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	TCF4	P15884	667 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	ZNF182	P17025	639 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	AZGP1	P25311	298 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	KLRC2	P26717	231 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	CDC25C	P30307	473 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	TIA1	P31483	386 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	PCGF2	P35227	344 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	SERPINB6	P35237	376 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	TAGLN2	P37802	199 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	STAT6	P42226	847 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	FRK	P42685	505 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	AGTR2	P50052	363 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	YWHAZ	P63104	245 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	ID2	Q02363	134 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	KIF5A	Q12840	1032 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	GPM6B	Q13491	265 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	RAPSN	Q13702	412 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	DPYS	Q14117	519 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	VGLL4	Q14135	290 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	CYP1B1	Q16678	543 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	IMMT	Q16891	758 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	IFI44L	Q53G44	452 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	KLHL26	Q53HC5	615 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	XKR9	Q5GH70	373 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	LCTL	Q6UWM7	567 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	MDGA2	Q7Z553	956 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	TAF8	Q7Z7C8	310 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	SYVN1	Q86TM6	617 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	LDB1	Q86U70	411 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	TSPAN33	Q86UF1	283 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	RASGEF1C	Q8N431	466 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	FBXO39	Q8N4B4	442 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	EXD3	Q8N9H8	876 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	OR6C4	Q8NGE1	309 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	EXOC6	Q8TAG9	804 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	OSR1	Q8TAX0	266 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	HEXDC	Q8WVB3	486 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	THRSP	Q92748	146 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	R3HDM4	Q96D70	268 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	EDC3	Q96F86	508 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	ZFYVE19	Q96K21	471 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	GPR78	Q96P69	363 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	PRR25	Q96S07	402 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	CDX2	Q99626	313 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	SEPT5	Q99719	369 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	CADM1	Q9BY67	442 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	PUS3	Q9BZE2	481 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	RTN4R	Q9BZR6	473 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	TMEM39B	Q9GZU3	492 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	SPATC1L	Q9H0A9	340 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	PPIL3	Q9H2H8	161 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	TDRD3	Q9H7E2	651 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	MINDY3	Q9H8M7	445 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	PIH1D3	Q9NQM4	214 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	ARL15	Q9NXU5	204 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	ANKMY1	Q9P2S6	941 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	SUN2	Q9UH99	717 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	MAU2	Q9Y6X3	613 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	LAMB2	P55268	1798 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-223	ENST00000524356	CDH23	Q9H251	3354 aa		4.16	□□□□□ -1.74
PCM1-223	ENST00000524356		A1L4Q6	167 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	TRIM77	I1YAP6	450 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CYTIP	O60759	359 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	PMPCB	O75439	489 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CREG1	O75629	220 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	RSL1D1	O76021	490 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CNTN5	O94779	1100 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CXCL14	O95715	111 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	GH1	P01241	217 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	SERPING1	P05155	500 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	SBK2	P0C263	348 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	LINGO3	P0C6S8	592 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	AREG	P15514	252 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CREB1	P16220	341 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	HOXB9	P17482	250 aa	Predicted RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	PPP2R1A	P30153	589 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	GK	P32189	559 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	SLC8A1	P32418	973 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	SOX6	P35712	828 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	PTGER3	P43115	390 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	ARSE	P51690	589 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	TAS2R40	P59535	323 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	TXNL4A	P83876	142 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms