RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-253	ENST00000523805	PPP1R21	Q6ZMI0	780 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	FAM214B	Q7L5A3	538 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	CTAGE6	Q86UF2	777 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	AMIGO1	Q86WK6	493 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	APLF	Q8IW19	511 aa	Predicted RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	TMEM151B	Q8IW70	566 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	CTAGE4	Q8IX94	777 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	FAM26E	Q8N5C1	309 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	C2orf73	Q8N5S3	287 aa	Predicted RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	C19orf47	Q8N9M1	422 aa	Known RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	DNAAF3	Q8N9W5	541 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	FDCSP	Q8NFU4	85 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	OR52K1	Q8NGK4	314 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	CFAP61	Q8NHU2	1237 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	THAP4	Q8WY91	577 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	TFG	Q92734	400 aa	Predicted RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	CDKN2AIPNL	Q96HQ2	116 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	LINC00615	Q96LM1	132 aa	Predicted RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	FCRL4	Q96PJ5	515 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	TRAPPC9	Q96Q05	1148 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	NAP1L3	Q99457	506 aa	Predicted RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	NUDT9	Q9BW91	350 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	CARD6	Q9BX69	1037 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	SPRTN	Q9H040	489 aa	Predicted RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	LRRC40	Q9H9A6	602 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	FAM60A	Q9NP50	221 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	NLE1	Q9NVX2	485 aa	Predicted RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	SPHK1	Q9NYA1	384 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	DHCR7	Q9UBM7	475 aa	Known RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	TCFL5	Q9UL49	500 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	CDYL	Q9Y232	598 aa		7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	RP1L1	Q8IWN7	2480 aa	Predicted RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	UBR5	O95071	2799 aa	Predicted RBP	7.75	□□□□□ -1.17
PTK2-253	ENST00000523805	MAST4	O15021	2626 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	CCDC162P	A2VCL2	907 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	AGAP14	A8MT82	685 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805		E7EVH7	732 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	MATN2	O00339	956 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	DYNC1I1	O14576	645 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	OR1I1	O60431	355 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	OR2B3	O76000	313 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	IFNB1	P01574	187 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	RNF224	P0DH78	156 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	CBSL	P0DN79	551 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	AGXT	P21549	392 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	NME2	P22392	152 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	ARNT	P27540	789 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	PTPN7	P35236	360 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	RORA	P35398	523 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	CBS	P35520	551 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	MRPL49	Q13405	166 aa	Known RBP	7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	SNX1	Q13596	522 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	ZIC1	Q15915	447 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	P3H1	Q32P28	736 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	GPR33	Q49SQ1	333 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	IZUMO3	Q5VZ72	239 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	UNC5A	Q6ZN44	842 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	LDB1	Q86U70	411 aa	Predicted RBP	7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	RAB43	Q86YS6	212 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	CREG2	Q8IUH2	290 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	GPR135	Q8IZ08	494 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	ADGRF3	Q8IZF5	1079 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	ZBTB2	Q8N680	514 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	METTL27	Q8N6F8	245 aa	Predicted RBP	7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	ZNF655	Q8N720	491 aa	Predicted RBP	7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	OR8K5	Q8NH50	307 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	LKAAEAR1	Q8TD35	194 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	ACTRT1	Q8TDG2	376 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	ADAMTS17	Q8TE56	1095 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	HEXDC	Q8WVB3	486 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	SEC14L1	Q92503	715 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	SGSM3	Q96HU1	749 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	IL17F	Q96PD4	163 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	NLN	Q9BYT8	704 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	MVB12B	Q9H7P6	319 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	SLAMF7	Q9NQ25	335 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	CASS4	Q9NQ75	786 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	TXLNG	Q9NUQ3	528 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	GPR83	Q9NYM4	423 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	SLC2A6	Q9UGQ3	507 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	NDOR1	Q9UHB4	597 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	SERTAD3	Q9UJW9	196 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	TTC7A	Q9ULT0	858 aa	Predicted RBP	7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	G3BP2	Q9UN86	482 aa	Known RBP	7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	PTRH2	Q9Y3E5	179 aa	Known RBP	7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	SPTAN1	Q13813	2472 aa	Known RBP	7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	LRRK2	Q5S007	2527 aa		7.74	□□□□□ -1.17
PTK2-253	ENST00000523805	SVIL	O95425	2214 aa		7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	IGLV3-16	A0A075B6K0	115 aa		7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	TRBV5-4	A0A0C4DH59	114 aa		7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	C17orf113	A0A1B0GUU1	675 aa		7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	KLHL33	A6NCF5	533 aa		7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	KRT87P	A6NCN2	255 aa		7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	IQCF5	A8MTL0	148 aa		7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	PGRMC1	O00264	195 aa	Known RBP	7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	AP2A1	O95782	977 aa		7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	GOT2	P00505	430 aa	Known RBP	7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	FTH1	P02794	183 aa		7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	CAPN1	P07384	714 aa		7.73	□□□□□ -1.17
PTK2-253	ENST00000523805	TUBB	P07437	444 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms