RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 WASHC2DQ5SRD0 308 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 YOD1Q5VVQ6 348 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-223ENST00000523125 RNF44Q7L0R7 432 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 IGDCC3Q8IVU1 814 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 LMNTD2Q8IXW0 634 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
VEGFA-223ENST00000523125 FBXO15Q8NCQ5 510 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-223ENST00000523125 CD200R1Q8TD46 325 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 ZNF480Q8WV37 535 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 FKBP10Q96AY3 582 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 IP6K3Q96PC2 410 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 GPR21Q99679 349 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 SMAD5Q99717 465 aaKnown RBP11.84□□□□□ -0.51
VEGFA-223ENST00000523125 DPH7Q9BTV6 452 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 ACAT2Q9BWD1 397 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 SLC26A1Q9H2B4 701 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 WDR54Q9H977 334 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 PLAC1Q9HBJ0 212 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 FAM114A2Q9NRY5 505 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 P4HTMQ9NXG6 502 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 ZNF451Q9Y4E5 1061 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 PCDHGB7Q9Y5F8 929 aa11.84□□□□□ -0.51
VEGFA-223ENST00000523125 SCN3AQ9NY46 2000 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 A0A0J9YVX5 310 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 HYKKA2RU49 373 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 CLEC18AA5D8T8 446 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 E7ENX8 843 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 SORBS2O94875 1100 aaKnown RBP11.83□□□□□ -0.52
VEGFA-223ENST00000523125 ALBP02768 609 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 CATP04040 527 aaKnown RBP11.83□□□□□ -0.52
VEGFA-223ENST00000523125 MPC1LP0DKB6 136 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 ERVK-10P10266 1014 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 TCP1P17987 556 aaKnown RBP11.83□□□□□ -0.52
VEGFA-223ENST00000523125 PGAM1P18669 254 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 GABRB3P28472 473 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 CMPK1P30085 196 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 OR1D4P47884 311 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 PNLIPRP1P54315 467 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 TAP2Q03519 686 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 CRYMQ14894 314 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 NKG7Q16617 165 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 TTLL9Q3SXZ7 439 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 CLEC18BQ6UXF7 455 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 KCNMB4Q86W47 210 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 PAQR7Q86WK9 346 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 CREG2Q8IUH2 290 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 LRRC56Q8IYG6 542 aaPredicted RBP11.83□□□□□ -0.52
VEGFA-223ENST00000523125 CLEC18CQ8NCF0 446 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 C2CD4AQ8NCU7 369 aaPredicted RBP11.83□□□□□ -0.52
VEGFA-223ENST00000523125 PPFIBP2Q8ND30 876 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 CALML6Q8TD86 181 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 SMPDL3AQ92484 453 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 INPP5DQ92835 1189 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 SPSB2Q99619 263 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 PLCD4Q9BRC7 762 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 AARSD1Q9BTE6 412 aaKnown RBP11.83□□□□□ -0.52
VEGFA-223ENST00000523125 IARS2Q9NSE4 1012 aaKnown RBP11.83□□□□□ -0.52
VEGFA-223ENST00000523125 GPR83Q9NYM4 423 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 STOX2Q9P2F5 926 aaPredicted RBP11.83□□□□□ -0.52
VEGFA-223ENST00000523125 CTSFQ9UBX1 484 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 ZC3H7BQ9UGR2 993 aaKnown RBP11.83□□□□□ -0.52
VEGFA-223ENST00000523125 COMMD10Q9Y6G5 202 aa11.83□□□□□ -0.52
VEGFA-223ENST00000523125 VSTM2BA6NLU5 285 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 H0YGG7 62 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 ENO3P13929 434 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 MMP11P24347 488 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 RPA3P35244 121 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 HSD17B2P37059 387 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 SKIV2L2P42285 1042 aaKnown RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 SOX8P57073 446 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 ARF3P61204 181 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 PRDX1Q06830 199 aaKnown RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 SRSF1Q07955 248 aaKnown RBP eCLIP11.82□□□□□ -0.521e-7■■□□□ 13.4
VEGFA-223ENST00000523125 DHX9Q08211 1270 aaKnown RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 RAPSNQ13702 412 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 PRTGQ2VWP7 1150 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 FAM214AQ32MH5 1076 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 ICE2Q659A1 982 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 ZNF425Q6IV72 752 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 JMJD6Q6NYC1 403 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 PIWIL4Q7Z3Z4 852 aaKnown RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 CPNE9Q8IYJ1 553 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 METTL27Q8N6F8 245 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 RBMXL3Q8N7X1 1067 aaKnown RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 TTC29Q8NA56 475 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 Q8NA96 180 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 PDLIM2Q96JY6 352 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 C10orf90Q96M02 699 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 FER1L6-AS2Q96M78 137 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 PWWP2AQ96N64 755 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 EBNA1BP2Q99848 306 aaKnown RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 ZFYVE21Q9BQ24 234 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 FAM167BQ9BTA0 163 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 CCDC68Q9H2F9 335 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 MRPS30Q9NP92 439 aaKnown RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 ASIC3Q9UHC3 531 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 TAC3Q9UHF0 121 aa11.82□□□□□ -0.52
VEGFA-223ENST00000523125 USP9XQ93008 2570 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-223ENST00000523125 LRRK2Q5S007 2527 aa11.81□□□□□ -0.52
VEGFA-223ENST00000523125 TTLL8A6PVC2 850 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms