RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ZSCAN9O15535 394 aaPredicted RBP17.13■□□□□ 0.33
CLK4-211ENST00000522556 PHGDHO43175 533 aaKnown RBP17.13■□□□□ 0.33
CLK4-211ENST00000522556 ZBTB14O43829 449 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 WISP3O95389 354 aaPredicted RBP17.13■□□□□ 0.33
CLK4-211ENST00000522556 ITGAXP20702 1163 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 RPA3P35244 121 aaPredicted RBP17.13■□□□□ 0.33
CLK4-211ENST00000522556 GCGRP47871 477 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 RGS4P49798 205 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 TBPL1P62380 186 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 SLC9A5Q14940 896 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 ARHGAP19Q14CB8 494 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 TBR1Q16650 682 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 OR4N4Q8N0Y3 316 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 N4BP2L2Q92802 583 aaPredicted RBP17.13■□□□□ 0.33
CLK4-211ENST00000522556 RBBP8Q99708 897 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 ATG10Q9H0Y0 220 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 ACTL8Q9H568 366 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 SYTL2Q9HCH5 934 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 IRAK4Q9NWZ3 460 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 SERTAD3Q9UJW9 196 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 ATRXP46100 2492 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 ZNF891A8MT65 544 aaPredicted RBP17.12■□□□□ 0.33
CLK4-211ENST00000522556 ATXN7O15265 892 aaPredicted RBP17.12■□□□□ 0.33
CLK4-211ENST00000522556 MAP3K7O43318 606 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 MT-ND3P03897 115 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 C8GP07360 202 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 CCNYL3P0C7X3 344 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 IL2P60568 153 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 SNRPNP63162 240 aaKnown RBP17.12■□□□□ 0.33
CLK4-211ENST00000522556 RHDQ02161 417 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 SP140Q13342 867 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 IL10RAQ13651 578 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 ERV3-1Q14264 604 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 ICE2Q659A1 982 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 SBSNQ6UWP8 590 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 RNF44Q7L0R7 432 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 PLD3Q8IV08 490 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 CTAGE3PQ8IX95 158 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 GPR135Q8IZ08 494 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 SPATA6LQ8N4H0 392 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 PPM1NQ8N819 430 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 ZSCAN1Q8NBB4 408 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 LRFN5Q96NI6 719 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 MRPS30Q9NP92 439 aaKnown RBP17.12■□□□□ 0.33
CLK4-211ENST00000522556 NINJ2Q9NZG7 142 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 KLK4Q9Y5K2 254 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 SEC16AO15027 2179 aa17.12■□□□□ 0.33
CLK4-211ENST00000522556 ERVH48-1M5A8F1 160 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 CNOT3O75175 753 aaKnown RBP17.11■□□□□ 0.33
CLK4-211ENST00000522556 C1QL1O75973 258 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 STATHP02808 62 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 FAM87AP0C7U9 286 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 CMPK1P30085 196 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 VSX2P58304 361 aaPredicted RBP17.11■□□□□ 0.33
CLK4-211ENST00000522556 PPP1R3AQ16821 1122 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 TAF1BQ53T94 588 aaPredicted RBP17.11■□□□□ 0.33
CLK4-211ENST00000522556 ZNF425Q6IV72 752 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 LRRC8EQ6NSJ5 796 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 AGTRAPQ6RW13 159 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 PAQR7Q86WK9 346 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 METTL27Q8N6F8 245 aaPredicted RBP17.11■□□□□ 0.33
CLK4-211ENST00000522556 ENDOVQ8N8Q3 282 aaKnown RBP17.11■□□□□ 0.33
CLK4-211ENST00000522556 EXD3Q8N9H8 876 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 MNS1Q8NEH6 495 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.11■□□□□ 0.33
CLK4-211ENST00000522556 IFT81Q8WYA0 676 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 ALKBH8Q96BT7 664 aaKnown RBP17.11■□□□□ 0.33
CLK4-211ENST00000522556 PYCR2Q96C36 320 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 MRRFQ96E11 262 aaKnown RBP17.11■□□□□ 0.33
CLK4-211ENST00000522556 ZNF285Q96NJ3 590 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 GBP5Q96PP8 586 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 GPR22Q99680 433 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 CPNE1Q99829 537 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 PLCD4Q9BRC7 762 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 PARVBQ9HBI1 364 aa17.11■□□□□ 0.33
CLK4-211ENST00000522556 INTS7Q9NVH2 962 aaKnown RBP17.11■□□□□ 0.33
CLK4-211ENST00000522556 UTP6Q9NYH9 597 aaKnown RBP17.11■□□□□ 0.33
CLK4-211ENST00000522556 HAT1O14929 419 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 SLC16A5O15375 505 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 GUCA1CO95843 209 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 TUBB4AP04350 444 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 GP5P40197 560 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 PRDX1Q06830 199 aaKnown RBP17.1■□□□□ 0.33
CLK4-211ENST00000522556 NAE1Q13564 534 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 PRAMEF13Q5VWM6 474 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 RHBDD2Q6NTF9 364 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 FBXO42Q6P3S6 717 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 CMC1Q7Z7K0 106 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 MCOLN3Q8TDD5 553 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 SLC39A7Q92504 469 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 CDKL2Q92772 493 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 MED8Q96G25 268 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 SELENOSQ9BQE4 189 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 SLC7A5P2Q9GIP4 190 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 CCDC177Q9NQR7 707 aaPredicted RBP17.1■□□□□ 0.33
CLK4-211ENST00000522556 SLC22A11Q9NSA0 550 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 NSMCE4AQ9NXX6 385 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 PCDHGA6Q9Y5G7 932 aa17.1■□□□□ 0.33
CLK4-211ENST00000522556 CDC14CA4D256 554 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 TARM1B6A8C7 271 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms