RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ONECUT2O95948 504 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 ERGP11308 486 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 RPA3P35244 121 aaPredicted RBP19.79■□□□□ 0.76
SDCBP-209ENST00000522243 TTLL9Q3SXZ7 439 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 VWA5B1Q5TIE3 1220 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 SLC6A19Q695T7 634 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 FBXO42Q6P3S6 717 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 RNF44Q7L0R7 432 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 PPIL6Q8IXY8 311 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 Q8NA96 180 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 GRK7Q8WTQ7 553 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 SPSB2Q99619 263 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 GPR21Q99679 349 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 GRPEL1Q9HAV7 217 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 MRPS30Q9NP92 439 aaKnown RBP19.79■□□□□ 0.76
SDCBP-209ENST00000522243 FAM114A2Q9NRY5 505 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 ANKMY1Q9P2S6 941 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 CTSFQ9UBX1 484 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 TAC3Q9UHF0 121 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 CDC23Q9UJX2 597 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 FBXO5Q9UKT4 447 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 VPS4AQ9UN37 437 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 MAP4K5Q9Y4K4 846 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 KLK4Q9Y5K2 254 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 ASH1LQ9NR48 2969 aaKnown RBP19.78■□□□□ 0.76
SDCBP-209ENST00000522243 GOLGA6L10A0A0M3HER8 536 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 AGPSO00116 658 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 HAUS5O94927 633 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 IGHEP01854 428 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 ALBP02768 609 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 GNLYP22749 145 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 FNTAP49354 379 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 PNLIPRP1P54315 467 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 MYBPC3Q14896 1274 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 PPP1R7Q15435 360 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 INPP5JQ15735 1006 aaPredicted RBP19.78■□□□□ 0.76
SDCBP-209ENST00000522243 HSP90AA5PQ58FG0 334 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 COL26A1Q96A83 441 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 ZFYVE21Q9BQ24 234 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 ZNF552Q9H707 407 aaPredicted RBP19.78■□□□□ 0.76
SDCBP-209ENST00000522243 ATP13A2Q9NQ11 1180 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 IARS2Q9NSE4 1012 aaKnown RBP19.78■□□□□ 0.76
SDCBP-209ENST00000522243 MAP10Q9P2G4 905 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 SNX12Q9UMY4 172 aa19.78■□□□□ 0.76
SDCBP-209ENST00000522243 CLEC18AA5D8T8 446 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 H0YGG7 62 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 ZSCAN12O43309 604 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 BANF1O75531 89 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 MPC1LP0DKB6 136 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 MMP11P24347 488 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 ARF3P61204 181 aaPredicted RBP19.77■□□□□ 0.76
SDCBP-209ENST00000522243 RNASEH2BQ5TBB1 312 aaKnown RBP19.77■□□□□ 0.76
SDCBP-209ENST00000522243 CLEC18BQ6UXF7 455 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 CYHR1Q6ZMK1 362 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 NEK10Q6ZWH5 1172 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 HPS6Q86YV9 775 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 CPNE9Q8IYJ1 553 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 PRSS58Q8IYP2 241 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 FAM26EQ8N5C1 309 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.77■□□□□ 0.76
SDCBP-209ENST00000522243 CLEC18CQ8NCF0 446 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 CALML6Q8TD86 181 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 ZNF480Q8WV37 535 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 KCNJ9Q92806 393 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 INPP5DQ92835 1189 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 PNPLA2Q96AD5 504 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 DDX47Q9H0S4 455 aaKnown RBP19.77■□□□□ 0.76
SDCBP-209ENST00000522243 SLC26A1Q9H2B4 701 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 KCNF1Q9H3M0 494 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 WDR54Q9H977 334 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 SYNPO2LQ9H987 977 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 ZNF304Q9HCX3 659 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 ENAMQ9NRM1 1142 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 C5AR2Q9P296 337 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 ASIC3Q9UHC3 531 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 FBXL4Q9UKA2 621 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 DHRS7Q9Y394 339 aa19.77■□□□□ 0.76
SDCBP-209ENST00000522243 MDC1Q14676 2089 aaKnown RBP19.76■□□□□ 0.75
SDCBP-209ENST00000522243 HEATR5BQ9P2D3 2071 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 IGKV1-8A0A0C4DH67 115 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 SOCS6O14544 535 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 SLC16A8O95907 504 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 ERVK-10P10266 1014 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 ITGA3P26006 1051 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 ARHGAP19Q14CB8 494 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 PLEKHN1Q494U1 663 aaPredicted RBP19.76■□□□□ 0.75
SDCBP-209ENST00000522243 ICE2Q659A1 982 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 KCNMB4Q86W47 210 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 CD200R1Q8TD46 325 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 CABS1Q96KC9 395 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 NDNQ99608 321 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 PLCD4Q9BRC7 762 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 AARSD1Q9BTE6 412 aaKnown RBP19.76■□□□□ 0.75
SDCBP-209ENST00000522243 ZBTB20Q9HC78 741 aaPredicted RBP19.76■□□□□ 0.75
SDCBP-209ENST00000522243 HS3ST3B1Q9Y662 390 aa19.76■□□□□ 0.75
SDCBP-209ENST00000522243 UBR5O95071 2799 aaPredicted RBP19.76■□□□□ 0.75
SDCBP-209ENST00000522243 FLNBO75369 2602 aaKnown RBP19.75■□□□□ 0.75
SDCBP-209ENST00000522243 SETXQ7Z333 2677 aaKnown RBP19.75■□□□□ 0.75
SDCBP-209ENST00000522243 E7ENX8 843 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 SMAPO00193 183 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms