RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 WDR34Q96EX3 536 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 CDC42EP4Q9H3Q1 356 aaKnown RBP9.08□□□□□ -0.96
CLK4-209ENST00000521621 PELI2Q9HAT8 420 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 FAM60AQ9NP50 221 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 SLC6A20Q9NP91 592 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 PCMTD2Q9NV79 361 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 UNC13CQ8NB66 2214 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 CAPN1P07384 714 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 CD1DP15813 335 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 ZNF28P17035 718 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 SLC6A12P48065 614 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 MRPS25P82663 173 aaKnown RBP9.08□□□□□ -0.96
CLK4-209ENST00000521621 FOXM1Q08050 763 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 SF1Q15637 639 aaKnown RBP9.08□□□□□ -0.96
CLK4-209ENST00000521621 COL28A1Q2UY09 1125 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 PRTGQ2VWP7 1150 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 HP1BP3Q5SSJ5 553 aaPredicted RBP9.08□□□□□ -0.96
CLK4-209ENST00000521621 NIPAL1Q6NVV3 410 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 FOXR1Q6PIV2 292 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 AGTRAPQ6RW13 159 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 TAOK1Q7L7X3 1001 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 SYVN1Q86TM6 617 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 CEP97Q8IW35 865 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 PDPRQ8NCN5 879 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 TTC9Q92623 222 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 TM4SF19Q96DZ7 209 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 IL17FQ96PD4 163 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 ADNPQ9H2P0 1102 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 EHD1Q9H4M9 534 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 WDR54Q9H977 334 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 NMRAL1Q9HBL8 299 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 MRPS30Q9NP92 439 aaKnown RBP9.08□□□□□ -0.96
CLK4-209ENST00000521621 SLC17A6Q9P2U8 582 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 NUP210LQ5VU65 1888 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 KIF26BQ2KJY2 2108 aa9.08□□□□□ -0.96
CLK4-209ENST00000521621 IGKV1-8A0A0C4DH67 115 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 ESYT3A0FGR9 886 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 TMEM150CB9EJG8 249 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 DSCR3O14972 297 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 ATXN7O15265 892 aaPredicted RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 KLK8O60259 260 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 KIAA0754O94854 1291 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 LIFP15018 202 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 ITPKBP27987 946 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 SLC12A2P55011 1212 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 RPS15AP62244 130 aaKnown RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 GRM7Q14831 915 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 FAM214AQ32MH5 1076 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 CAPN13Q6MZZ7 669 aaPredicted RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 PRMT9Q6P2P2 845 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 SKA2Q8WVK7 121 aaPredicted RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 MTBPQ96DY7 904 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 IP6K3Q96PC2 410 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 GBP5Q96PP8 586 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 ZFYVE21Q9BQ24 234 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 ACTR5Q9H9F9 607 aaPredicted RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 GPAMQ9HCL2 828 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 CTNNAL1Q9UBT7 734 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 TSC22D4Q9Y3Q8 395 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 PCDHGA4Q9Y5G9 962 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 LOC101059948A0A1B0GTJ6 334 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 A0A1W2PQ72 361 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 ZSCAN9O15535 394 aaPredicted RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 PRPF4O43172 522 aaKnown RBP eCLIP9.07□□□□□ -0.96
CLK4-209ENST00000521621 TIAF1O95411 115 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 IGHEP01854 428 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 KLK3P07288 261 aaPredicted RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 SFTPCP11686 197 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 MAGP20916 626 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 PPM1FP49593 454 aaPredicted RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 FASTKQ14296 549 aaKnown RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 KCNAB1Q14722 419 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 UGT8Q16880 541 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 PRAMEF13Q5VWM6 474 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 SULT1C3Q6IMI6 304 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 FBXO42Q6P3S6 717 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 TMEM126BQ8IUX1 230 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 GPR135Q8IZ08 494 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 TTC29Q8NA56 475 aaPredicted RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 CABS1Q96KC9 395 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 PPM1MQ96MI6 270 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 OR2A5Q96R48 311 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 NLNQ9BYT8 704 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 LHX6Q9UPM6 363 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 IGLV3-12A0A075B6K2 115 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 HMX2A2RU54 273 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 OR2B3O76000 313 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 TUBBP07437 444 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 ANXA5P08758 320 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 SLC35E2BP0CK96 405 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 NPPBP16860 134 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 SERPINB8P50452 374 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 TBPL1P62380 186 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 USP10Q14694 798 aaKnown RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 PHKG1Q16816 387 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 MRPL14Q6P1L8 145 aaKnown RBP9.07□□□□□ -0.96
CLK4-209ENST00000521621 GALNT6Q8NCL4 622 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 NUDT4Q9NZJ9 180 aa9.07□□□□□ -0.96
CLK4-209ENST00000521621 GOLGA4Q13439 2230 aaKnown RBP9.06□□□□□ -0.96
CLK4-209ENST00000521621 PABPN1LA6NDY0 278 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms