RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TMEM207Q6UWW9 146 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 MBOAT1Q6ZNC8 495 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 CTAGE6Q86UF2 777 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 CTAGE4Q8IX94 777 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 VPS39Q96JC1 886 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 CCDC138Q96M89 665 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 DPH7Q9BTV6 452 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 GPR87Q9BY21 358 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 ACTL8Q9H568 366 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 LRRC4CQ9HCJ2 640 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 MRPS30Q9NP92 439 aaKnown RBP19.81■□□□□ 0.76
TRIM35-203ENST00000521253 ABCF3Q9NUQ8 709 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 STOX2Q9P2F5 926 aaPredicted RBP19.81■□□□□ 0.76
TRIM35-203ENST00000521253 DMGDHQ9UI17 866 aaKnown RBP19.81■□□□□ 0.76
TRIM35-203ENST00000521253 BOD1L1Q8NFC6 3051 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 CFAP46Q8IYW2 2715 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 IGKV1-8A0A0C4DH67 115 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 OR2A25A4D2G3 310 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 TK2O00142 265 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 CREG1O75629 220 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 ZNF37AP17032 561 aaPredicted RBP19.8■□□□□ 0.76
TRIM35-203ENST00000521253 PTPN4P29074 926 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 RPS18P62269 152 aaKnown RBP19.8■□□□□ 0.76
TRIM35-203ENST00000521253 RPS15P62841 145 aaKnown RBP19.8■□□□□ 0.76
TRIM35-203ENST00000521253 PRDX1Q06830 199 aaKnown RBP19.8■□□□□ 0.76
TRIM35-203ENST00000521253 LY6DQ14210 128 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 ERV3-1Q14264 604 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 ZNF460Q14592 562 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 NAA25Q14CX7 972 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 C1orf189Q5VU69 101 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 ICE2Q659A1 982 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 FAM198BQ6UWH4 519 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 ZNF285Q96NJ3 590 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 CATSPER2Q96P56 530 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 DPH2Q9BQC3 489 aaPredicted RBP19.8■□□□□ 0.76
TRIM35-203ENST00000521253 SELENOSQ9BQE4 189 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 DHCR7Q9UBM7 475 aaKnown RBP19.8■□□□□ 0.76
TRIM35-203ENST00000521253 IKZF3Q9UKT9 509 aa19.8■□□□□ 0.76
TRIM35-203ENST00000521253 CCNDBP1O95273 360 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 CAPN1P07384 714 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 FURINP09958 794 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 GCGRP47871 477 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 BORAQ6PGQ7 559 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 CEP97Q8IW35 865 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 PDLIM5Q96HC4 596 aaKnown RBP19.79■□□□□ 0.76
TRIM35-203ENST00000521253 GBP5Q96PP8 586 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 CPNE1Q99829 537 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 PLCD4Q9BRC7 762 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 STARD5Q9NSY2 213 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 TXNDC16Q9P2K2 825 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 SRPK3Q9UPE1 567 aa19.79■□□□□ 0.76
TRIM35-203ENST00000521253 FARSAQ9Y285 508 aaKnown RBP19.79■□□□□ 0.76
TRIM35-203ENST00000521253 MTO1Q9Y2Z2 717 aaKnown RBP19.79■□□□□ 0.76
TRIM35-203ENST00000521253 A0A0J9YVX5 310 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 EIF4E1BA6NMX2 242 aaKnown RBP19.78■□□□□ 0.76
TRIM35-203ENST00000521253 PRB1P04280 392 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 RAB40ALP0C0E4 278 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 HIST1H2AGP0C0S8 130 aaPredicted RBP19.78■□□□□ 0.76
TRIM35-203ENST00000521253 HIST1H2ADP20671 130 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 AGXTP21549 392 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 GP5P40197 560 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 TBPL1P62380 186 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 ABATP80404 500 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 ILF2Q12905 390 aaKnown RBP19.78■□□□□ 0.76
TRIM35-203ENST00000521253 DEFB109BQ30KR1 87 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 KBTBD12Q3ZCT8 623 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 TCTE1Q5JU00 501 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 THEMIS2Q5TEJ8 643 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 FRMPD2BQ6IN97 320 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 FBXO42Q6P3S6 717 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 RNF44Q7L0R7 432 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 PAQR7Q86WK9 346 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 CTAGE3PQ8IX95 158 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 ENDOVQ8N8Q3 282 aaKnown RBP19.78■□□□□ 0.76
TRIM35-203ENST00000521253 EXD3Q8N9H8 876 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 PROKR1Q8TCW9 393 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 FBF1Q8TES7 1133 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 HIST1H2AHQ96KK5 128 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 HIST1H2AJQ99878 128 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 ARHGAP9Q9BRR9 750 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 H2AFJQ9BTM1 129 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 NDC1Q9BTX1 674 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 NLNQ9BYT8 704 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 SEMA4CQ9C0C4 833 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 ATG10Q9H0Y0 220 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 CCDC177Q9NQR7 707 aaPredicted RBP19.78■□□□□ 0.76
TRIM35-203ENST00000521253 ENAMQ9NRM1 1142 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 TXLNGQ9NUQ3 528 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 ANKMY1Q9P2S6 941 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 SEC16AO15027 2179 aa19.78■□□□□ 0.76
TRIM35-203ENST00000521253 LOC105369274A0A096LPK9 316 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 LOC102723532A0A0G2JNH3 316 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 CDC14CA4D256 554 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 SRPX2O60687 465 aaPredicted RBP19.77■□□□□ 0.76
TRIM35-203ENST00000521253 RECKO95980 971 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 FAM87AP0C7U9 286 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 STX2P32856 288 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 VSX2P58304 361 aaPredicted RBP19.77■□□□□ 0.76
TRIM35-203ENST00000521253 NFKB2Q00653 900 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 POU4F1Q01851 419 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 306.6 ms