RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 CALML6Q8TD86 181 aa15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 SMPDL3AQ92484 453 aa15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 RERGQ96A58 199 aaPredicted RBP15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 PNPLA2Q96AD5 504 aa15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 SMAD5Q99717 465 aaKnown RBP15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 CRB3Q9BUF7 120 aa15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 SLC6A20Q9NP91 592 aa15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 IARS2Q9NSE4 1012 aaKnown RBP15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 UTP6Q9NYH9 597 aaKnown RBP15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 NXT1Q9UKK6 140 aaKnown RBP15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 TLN1Q9Y490 2541 aaKnown RBP15.44■□□□□ 0.06
IGHV3-42-201ENST00000520410 LOC105369274A0A096LPK9 316 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 LOC102723532A0A0G2JNH3 316 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 PABPN1LA6NDY0 278 aaKnown RBP15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 ZSCAN12O43309 604 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 SORBS2O94875 1100 aaKnown RBP15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 MMP11P24347 488 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 GLRBP48167 497 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 YBX1P67809 324 aaKnown RBP15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 MPP1Q00013 466 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 AIMP2Q13155 320 aaKnown RBP15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 MUM1Q2TAK8 710 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 COX15Q7KZN9 410 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 REXO1L1PQ8IX06 675 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 OR4N4Q8N0Y3 316 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 ALKBH8Q96BT7 664 aaKnown RBP15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 MIEF2Q96C03 454 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 CNDP1Q96KN2 507 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 OSBPL9Q96SU4 736 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 PKP4Q99569 1192 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 GPR21Q99679 349 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 FAM167BQ9BTA0 163 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 WDR54Q9H977 334 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 SLC22A11Q9NSA0 550 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 TRMT1Q9NXH9 659 aaKnown RBP15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 C5AR2Q9P296 337 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 PCYOX1Q9UHG3 505 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 MAP4K5Q9Y4K4 846 aa15.43■□□□□ 0.06
IGHV3-42-201ENST00000520410 A0A1W2PPV9 198 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 SMAPO00193 183 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 MAP2K7O14733 419 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 FFAR3O14843 346 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 GPR42O15529 346 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 ZBTB14O43829 449 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 PRICKLE3O43900 615 aaPredicted RBP15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 PSIP1O75475 530 aaKnown RBP15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 MATN4O95460 622 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 ALBP02768 609 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 ANXA5P08758 320 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 MAGEA6P43360 314 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 ADARP55265 1226 aaKnown RBP15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 HSP90AA5PQ58FG0 334 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 PRAMEF13Q5VWM6 474 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 UBE2R2Q712K3 238 aaPredicted RBP15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 RNF44Q7L0R7 432 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 KCNMB4Q86W47 210 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 PALM2Q8IXS6 379 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 PPIL6Q8IXY8 311 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 CPNE9Q8IYJ1 553 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 CISD2Q8N5K1 135 aaKnown RBP15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 CSNK1A1LQ8N752 337 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 MCUQ8NE86 351 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 GABPB2Q8TAK5 448 aaPredicted RBP15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 PRR7Q8TB68 274 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 HMGCLL1Q8TB92 370 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 COG1Q8WTW3 980 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 SLC30A3Q99726 388 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 PPANQ9NQ55 473 aaKnown RBP15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 ZNF282Q9UDV7 671 aaPredicted RBP15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 TRMT6Q9UJA5 497 aaKnown RBP15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 B3GNT3Q9Y2A9 372 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 PCSK5Q92824 1860 aa15.42■□□□□ 0.06
IGHV3-42-201ENST00000520410 SPTBP11277 2137 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 CYSRT1A8MQ03 144 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 H0YGG7 62 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 MYO1CO00159 1063 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 PRPF4O43172 522 aaKnown RBP eCLIP15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 STATHP02808 62 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 VARSP26640 1264 aaKnown RBP15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 HSD17B2P37059 387 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 CARSP49589 748 aaKnown RBP15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 CLCN7P51798 805 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 ARF3P61204 181 aaPredicted RBP15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 MRPL49Q13405 166 aaKnown RBP15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 ELOAQ14241 798 aaKnown RBP15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 MFSD4BQ5TF39 518 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 ARMC3Q5W041 872 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 ICE2Q659A1 982 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 FAAH2Q6GMR7 532 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 PIWIL4Q7Z3Z4 852 aaKnown RBP15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 SPNS2Q8IVW8 549 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 Q8NA96 180 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 KCNJ9Q92806 393 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 INPP5DQ92835 1189 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 MMABQ96EY8 250 aaPredicted RBP15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 THOC3Q96J01 351 aaKnown RBP15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 NDNQ99608 321 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 SPSB2Q99619 263 aa15.41■□□□□ 0.06
IGHV3-42-201ENST00000520410 EPS8L2Q9H6S3 715 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms