RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 PCDHGA11Q9Y5H2 935 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 MAGED1Q9Y5V3 778 aaPredicted RBP24.96■■□□□ 1.59
COL13A1-213ENST00000520267 TCF20Q9UGU0 1960 aaKnown RBP24.96■■□□□ 1.59
COL13A1-213ENST00000520267 HLA-EP13747 358 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 ACPPP15309 386 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 SLC6A11P48066 632 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 ALDH3B2P48448 385 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 LSAMPQ13449 338 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.96■■□□□ 1.59
COL13A1-213ENST00000520267 GPR180Q86V85 440 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 NRSN1Q8IZ57 195 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 TMIGD2Q96BF3 282 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 FAM120BQ96EK7 910 aaKnown RBP24.96■■□□□ 1.59
COL13A1-213ENST00000520267 SLC47A1Q96FL8 570 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 ZFYVE19Q96K21 471 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 COQ10AQ96MF6 247 aa24.96■■□□□ 1.59
COL13A1-213ENST00000520267 MTERF1Q99551 399 aaKnown RBP24.96■■□□□ 1.59
COL13A1-213ENST00000520267 H3BSA7 217 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 NPC1O15118 1278 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 PRKD3O94806 890 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 CATP04040 527 aaKnown RBP24.95■■□□□ 1.58
COL13A1-213ENST00000520267 MYOGP15173 224 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 NRIP1P48552 1158 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 CSTF3Q12996 717 aaKnown RBP24.95■■□□□ 1.58
COL13A1-213ENST00000520267 DDX39BQ13838 428 aaKnown RBP24.95■■□□□ 1.58
COL13A1-213ENST00000520267 MAP7Q14244 749 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 KCTD21Q4G0X4 260 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 ATL1Q8WXF7 558 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 DTD2Q96FN9 168 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 SLC27A6Q9Y2P4 619 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 CREG1O75629 220 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 SLC16A8O95907 504 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 SOD1P00441 154 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 IMPA1P29218 277 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 ADARB1P78563 741 aaKnown RBP24.95■■□□□ 1.58
COL13A1-213ENST00000520267 PON2Q15165 354 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 SF1Q15637 639 aaKnown RBP24.95■■□□□ 1.58
COL13A1-213ENST00000520267 GPR149Q86SP6 731 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 TRIM74Q86UV6 250 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 C12orf76Q8N812 135 aaPredicted RBP24.95■■□□□ 1.58
COL13A1-213ENST00000520267 OR52E4Q8NGH9 312 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 CSGALNACT1Q8TDX6 532 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 GULP1Q9UBP9 304 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 PRKAG2Q9UGJ0 569 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 CEPT1Q9Y6K0 416 aa24.95■■□□□ 1.58
COL13A1-213ENST00000520267 H0Y858 1186 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 ADH1CP00326 375 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 MYCLP1P12525 358 aaPredicted RBP24.94■■□□□ 1.58
COL13A1-213ENST00000520267 ARSFP54793 590 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 TUBA4AP68366 448 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 BORAQ6PGQ7 559 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 SYT12Q8IV01 421 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 ST13P5Q8NFI4 369 aaPredicted RBP24.94■■□□□ 1.58
COL13A1-213ENST00000520267 OR7A2PQ8NGA2 310 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 NETO1Q8TDF5 533 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 NCLNQ969V3 563 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 ARRDC3Q96B67 414 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 VPS29Q9UBQ0 182 aa24.94■■□□□ 1.58
COL13A1-213ENST00000520267 PSMD11O00231 422 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 RFXANKO14593 260 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 C1QCP02747 245 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 SLC14A1Q13336 389 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 ADNP2Q6IQ32 1131 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 GRHL2Q6ISB3 625 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 NLRP8Q86W28 1048 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 ETFBKMTQ8IXQ9 262 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 KLHDC8AQ8IYD2 350 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 DCAF13Q9NV06 445 aaKnown RBP24.93■■□□□ 1.58
COL13A1-213ENST00000520267 SPATA6Q9NWH7 488 aaPredicted RBP24.93■■□□□ 1.58
COL13A1-213ENST00000520267 K7ESM1 405 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 PLK4O00444 970 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 IST1P53990 364 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 MTAPQ13126 283 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 DAG1Q14118 895 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 UGT8Q16880 541 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 ZIK1Q3SY52 487 aaPredicted RBP24.93■■□□□ 1.58
COL13A1-213ENST00000520267 PSRC1Q6PGN9 363 aaPredicted RBP24.93■■□□□ 1.58
COL13A1-213ENST00000520267 USP51Q70EK9 711 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 ZNF551Q7Z340 670 aaPredicted RBP24.93■■□□□ 1.58
COL13A1-213ENST00000520267 PATL1Q86TB9 770 aaKnown RBP24.93■■□□□ 1.58
COL13A1-213ENST00000520267 STK32CQ86UX6 486 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 VCX3AQ9NNX9 186 aa24.93■■□□□ 1.58
COL13A1-213ENST00000520267 OTOL1A6NHN0 477 aaPredicted RBP24.92■■□□□ 1.58
COL13A1-213ENST00000520267 C5orf67F2Z3F1 127 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 CST1P01037 141 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 PRNPP04156 253 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 PRPS1L1P21108 318 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 KIR3DL1P43629 444 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 ALDH3A2P51648 485 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 ZNF33BQ06732 778 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 LAPTM5Q13571 262 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 ZNF658BQ4V348 819 aaPredicted RBP24.92■■□□□ 1.58
COL13A1-213ENST00000520267 FNDC3BQ53EP0 1204 aaKnown RBP24.92■■□□□ 1.58
COL13A1-213ENST00000520267 OR56A3Q8NH54 315 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 HERVK_113Q902F9 699 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 SMG7Q92540 1137 aaKnown RBP24.92■■□□□ 1.58
COL13A1-213ENST00000520267 REXO4Q9GZR2 422 aaKnown RBP24.92■■□□□ 1.58
COL13A1-213ENST00000520267 PTTG2Q9NZH5 202 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 RWDD3Q9Y3V2 267 aa24.92■■□□□ 1.58
COL13A1-213ENST00000520267 BMP10O95393 424 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms