RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 A0A0J9YY10 115 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 CASC3O15234 703 aaKnown RBP17.15■□□□□ 0.34
SDC2-205ENST00000520233 H2AFYO75367 372 aaKnown RBP17.15■□□□□ 0.34
SDC2-205ENST00000520233 KATNA1O75449 491 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 FGF3P11487 239 aaPredicted RBP17.15■□□□□ 0.34
SDC2-205ENST00000520233 CDK4P11802 303 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 CEACAM1P13688 526 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 GFERP55789 205 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 PPP1CAP62136 330 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 CFAP157Q5JU67 520 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 CARFQ8N187 725 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 CCNYL1Q8N7R7 359 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 OR4D9Q8NGE8 314 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 OR6Y1Q8NGX8 325 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 NSUN5Q96P11 429 aaKnown RBP17.15■□□□□ 0.34
SDC2-205ENST00000520233 TGM7Q96PF1 710 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 NUDT22Q9BRQ3 303 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 SYNDIG1Q9H7V2 258 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 MRPS30Q9NP92 439 aaKnown RBP17.15■□□□□ 0.34
SDC2-205ENST00000520233 C1GALT1Q9NS00 363 aa17.15■□□□□ 0.34
SDC2-205ENST00000520233 TLCD2A6NGC4 264 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 CLGNO14967 610 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 SERPINE1P05121 402 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 NEFHP12036 1026 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 HOXB3P14651 431 aaPredicted RBP17.14■□□□□ 0.33
SDC2-205ENST00000520233 GNAZP19086 355 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 EPORP19235 508 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 SDHBP21912 280 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 CDH3P22223 829 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 HRH2P25021 359 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 ATP1A2P50993 1020 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 CLCQ05315 142 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 PCDH1Q08174 1060 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 SPIDRQ14159 915 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 NAA25Q14CX7 972 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 KIAA1614Q5VZ46 1190 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 FAM92BQ6ZTR7 304 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 RPS27LQ71UM5 84 aaKnown RBP17.14■□□□□ 0.33
SDC2-205ENST00000520233 TRIM73Q86UV7 250 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 PPP1R14CQ8TAE6 165 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 FAM76AQ8TAV0 307 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 SLC5A11Q8WWX8 675 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 NEIL2Q969S2 332 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 MOCOSQ96EN8 888 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 CNDP1Q96KN2 507 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 MAP3K3Q99759 626 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 SEMA6CQ9H3T2 930 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 GSTO2Q9H4Y5 243 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 IPPKQ9H8X2 491 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 ZBTB26Q9HCK0 441 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 ACSS2Q9NR19 701 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 FAM53CQ9NYF3 392 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 TMEM9Q9P0T7 183 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 SEMA5BQ9P283 1151 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 PDP2Q9P2J9 529 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 SH2B3Q9UQQ2 575 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 KLK4Q9Y5K2 254 aa17.14■□□□□ 0.33
SDC2-205ENST00000520233 ANKRD12Q6UB98 2062 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 D6RAR5 112 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 TOX3O15405 576 aaPredicted RBP17.13■□□□□ 0.33
SDC2-205ENST00000520233 NPHS1O60500 1241 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 DKK1O94907 266 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 MLYCDO95822 493 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 CDH1P12830 882 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 SERPINB5P36952 375 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 GRIA3P42263 894 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 LSSP48449 732 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 CDH13P55290 713 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 YBX1P67809 324 aaKnown RBP17.13■□□□□ 0.33
SDC2-205ENST00000520233 CHI3L2Q15782 390 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 CCDC157Q569K6 752 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 ZNF574Q6ZN55 896 aaPredicted RBP17.13■□□□□ 0.33
SDC2-205ENST00000520233 ZCCHC23Q6ZST2 131 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 FRMD7Q6ZUT3 714 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 TMPRSS9Q7Z410 1059 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 PRSS42Q7Z5A4 293 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 TRIM42Q8IWZ5 723 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 FAM20CQ8IXL6 584 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 ABHD11Q8NFV4 315 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 RAB3IL1Q8TBN0 382 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 ZUFSPQ96AP4 578 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 PPM1MQ96MI6 270 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 RTKNQ9BST9 563 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 TRMOQ9BU70 441 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 NTMT1Q9BV86 223 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 NOL11Q9H8H0 719 aaKnown RBP17.13■□□□□ 0.33
SDC2-205ENST00000520233 PELI2Q9HAT8 420 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 SLC6A20Q9NP91 592 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 SEMA4BQ9NPR2 832 aaPredicted RBP17.13■□□□□ 0.33
SDC2-205ENST00000520233 TMEM184CQ9NVA4 438 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 CUEDC1Q9NWM3 386 aaPredicted RBP17.13■□□□□ 0.33
SDC2-205ENST00000520233 ANKMY1Q9P2S6 941 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 SNX7Q9UNH6 387 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 APOBEC2Q9Y235 224 aaKnown RBP17.13■□□□□ 0.33
SDC2-205ENST00000520233 STK38LQ9Y2H1 464 aa17.13■□□□□ 0.33
SDC2-205ENST00000520233 LAMA1P25391 3075 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 IGKV1-8A0A0C4DH67 115 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 E7EQ34 232 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 OR7A17O14581 309 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 KIF1CO43896 1103 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms