RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SMIM14Q96QK8 99 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 SECISBP2Q96T21 854 aaKnown RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 POLDIP3Q9BY77 421 aaKnown RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 GPR63Q9BZJ6 419 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 WWP1Q9H0M0 922 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 TRABDQ9H4I3 376 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 MVB12BQ9H7P6 319 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ZNF160Q9HCG1 818 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 PARVAQ9NVD7 372 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 RIC8BQ9NVN3 520 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 RBM22Q9NW64 420 aaKnown RBP eCLIP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 SMOXQ9NWM0 555 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 PTGFRNQ9P2B2 879 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 PPT2Q9UMR5 302 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 PLCL2Q9UPR0 1127 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ZNF711Q9Y462 761 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 CFAP20Q9Y6A4 193 aaKnown RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ZANQ9Y493 2812 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ARHGAP21Q5T5U3 1957 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 A0A0J9YY10 115 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 FAM170AA1A519 330 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 ASPDHA6ND91 283 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 VSTM2BA6NLU5 285 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 OR2AG2A6NM03 316 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 IFRD1O00458 451 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 BIN1O00499 593 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 DDX3YO15523 660 aaKnown RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 PROM1O43490 865 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 ASNA1O43681 348 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 CTAG2O75638 210 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 GFPT2O94808 682 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 GOSR1O95249 250 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 WDPCPO95876 746 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 MT-CYBP00156 380 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 RAF1P04049 648 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 CCDC175P0C221 793 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 CCDC172P0C7W6 258 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 CHRNB2P17787 502 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 MSH3P20585 1137 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 CXCR2P25025 360 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 EEF1DP29692 281 aaKnown RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 MIPP30301 263 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 SHMT2P34897 504 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 PCK1P35558 622 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 SOX5P35711 763 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 GABRA4P48169 554 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 UBASH3AP57075 661 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 JAM2P57087 298 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 DSC2Q02487 901 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 GALNT2Q10471 571 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 GRM7Q14831 915 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 BRD3Q15059 726 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 TPD52L1Q16890 204 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 FAM214AQ32MH5 1076 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 BCL7AQ4VC05 210 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 KHDC1Q4VXA5 237 aaKnown RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 SHEQ5VZ18 495 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 TMEM198Q66K66 360 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 ATG9BQ674R7 924 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 TXNRD3NBQ6F5E7 133 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 ISM2Q6H9L7 571 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 PRMT9Q6P2P2 845 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 TMEM220Q6QAJ8 160 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 PAMR1Q6UXH9 720 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 FAM83HQ6ZRV2 1179 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 TTLL10Q6ZVT0 673 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 POLNQ7Z5Q5 900 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 DOLPP1Q86YN1 238 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 ARMC10Q8N2F6 343 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 CPSF7Q8N684 471 aaKnown RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 RASGEF1AQ8N9B8 481 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 TTC29Q8NA56 475 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 SPC24Q8NBT2 197 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 MNS1Q8NEH6 495 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 HM13Q8TCT9 377 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 PSMF1Q92530 271 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 RND1Q92730 232 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 MIEF2Q96C03 454 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 RBM41Q96IZ5 413 aaKnown RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 LINC00615Q96LM1 132 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 DMRTB1Q96MA1 342 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 NSUN5Q96P11 429 aaKnown RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 TSGA13Q96PP4 275 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 CSPG4P5Q96PW8 444 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 CRB3Q9BUF7 120 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 SPRTNQ9H040 489 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 CLEC4MQ9H2X3 399 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 SOX17Q9H6I2 414 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 VPS37BQ9H9H4 285 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 PLA2G3Q9NZ20 509 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 ACTR10Q9NZ32 417 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 DTLQ9NZJ0 730 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 OR6C2Q9NZP2 312 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 IL17CQ9P0M4 197 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 ZNF282Q9UDV7 671 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-207ENST00000520168 PCSK1NQ9UHG2 260 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 ACAD8Q9UKU7 415 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 SHOC2Q9UQ13 582 aa4.66□□□□□ -1.66
SDCBP-207ENST00000520168 AKAP6Q13023 2319 aa4.65□□□□□ -1.66
SDCBP-207ENST00000520168 GLYATL1P3A0A0U1RQE8 302 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms