RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ZNF420Q8TAQ5 688 aaPredicted RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 EXT2Q93063 718 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 WBP2Q969T9 261 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 GAL3ST3Q96A11 431 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 BIRC7Q96CA5 298 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 RHBDF1Q96CC6 855 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ZNF689Q96CS4 500 aaPredicted RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 METTL2AQ96IZ6 378 aaKnown RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 B3GALT6Q96L58 329 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 MAGEB10Q96LZ2 347 aaPredicted RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 ZNF512Q96ME7 567 aaPredicted RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 MCCC1Q96RQ3 725 aaPredicted RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 CIB1Q99828 191 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 TUBA1CQ9BQE3 449 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 SPON2Q9BUD6 331 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 BDH2Q9BUT1 245 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 FAM126AQ9BYI3 521 aaPredicted RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 CD244Q9BZW8 370 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 RNF38Q9H0F5 515 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 SEMA6AQ9H2E6 1030 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 MAGIXQ9H6Y5 334 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 C12orf49Q9H741 205 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 RPF2Q9H7B2 306 aaKnown RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 DDX18Q9NVP1 670 aaKnown RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 SMOXQ9NWM0 555 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ELOVL2Q9NXB9 296 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 SMPD4Q9NXE4 827 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 SMPD3Q9NY59 655 aaPredicted RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 CD274Q9NZQ7 290 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 TMEM9Q9P0T7 183 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 NFKBIL1Q9UBC1 381 aaPredicted RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 RSL24D1Q9UHA3 163 aaKnown RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 ZNHIT2Q9UHR6 403 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 EIF2B4Q9UI10 523 aaKnown RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 VPS51Q9UID3 782 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 PKP3Q9Y446 797 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ASB1Q9Y576 335 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 TIMM22Q9Y584 194 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 FADS3Q9Y5Q0 445 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 SLC30A1Q9Y6M5 507 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 AP1M2Q9Y6Q5 423 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 KCNE1BA0A087WTH5 132 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 A0A1B0GTW7 788 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 FAM220BPB1ANY3 271 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 WASH3PC4AMC7 463 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 E5RI56 91 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 H0Y858 1186 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 K7EPI3 171 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 CBX4O00257 560 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ETV2O00321 342 aaPredicted RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 INPP4BO15327 924 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 SLC16A5O15375 505 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 RGS14O43566 566 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 NUAK1O60285 661 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 DPM1O60762 260 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 TBL1XO60907 577 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 KATNA1O75449 491 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 TRMUO75648 421 aaKnown RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 DNAJB5O75953 348 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 RSL1D1O76021 490 aaKnown RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 SCELO95171 688 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 PRAMEF12O95522 483 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 LDLRP01130 860 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 S100BP04271 92 aaPredicted RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 IL6P05231 212 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 CAPN1P07384 714 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 HNRNPCP07910 306 aaKnown RBP eCLIP4.92□□□□□ -1.62
SDC2-204ENST00000519914 RETP07949 1114 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ANXA6P08133 673 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 RAP2AP10114 183 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 G6PDP11413 515 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 PRPS2P11908 318 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 PORP16435 677 aaPredicted RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 BPIP17213 487 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 DCKP27707 260 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 SPAM1P38567 509 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 CSKP41240 450 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 NSG1P42857 185 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 RPS9P46781 194 aaKnown RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 ALDH7A1P49419 539 aaKnown RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 HLCSP50747 726 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 GZMMP51124 257 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ALDH3A2P51648 485 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ATXN3P54252 364 aaPredicted RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 OR4D2P58180 307 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 CREMQ03060 361 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 BCL2L1Q07817 233 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 SP140Q13342 867 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 PLD1Q13393 1074 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 TUBA3CQ13748 450 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 DAG1Q14118 895 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 E2F2Q14209 437 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 VEPH1Q14D04 833 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 CYP51A1Q16850 503 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 AP5B1Q2VPB7 878 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 TTLL9Q3SXZ7 439 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 TIGD2Q4W5G0 525 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 USP39Q53GS9 565 aaKnown RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 CYBRD1Q53TN4 286 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 RUNDC3AQ59EK9 446 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms