RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	FAM45A	Q8TCE6	357 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	HIST1H2AH	Q96KK5	128 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	HIST1H2AJ	Q99878	128 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	ZFYVE21	Q9BQ24	234 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	H2AFJ	Q9BTM1	129 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	DPH7	Q9BTV6	452 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	ACAT2	Q9BWD1	397 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	PCBD2	Q9H0N5	130 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	WHRN	Q9P202	907 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	SNX24	Q9Y343	169 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	UTP11	Q9Y3A2	253 aa	Known RBP	23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	ZNF462	Q96JM2	2506 aa		23.18	■■□□□ 1.3
CNOT7-204	ENST00000518885	DSCR3	O14972	297 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	CAPN1	P07384	714 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	F7	P08709	466 aa	Predicted RBP	23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	HRH2	P25021	359 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	RPL21	P46778	160 aa	Known RBP	23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	PRDX1	Q06830	199 aa	Known RBP	23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	ICE2	Q659A1	982 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	SUSD1	Q6UWL2	747 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	SYT10	Q6XYQ8	523 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	CYHR1	Q6ZMK1	362 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	MED25	Q71SY5	747 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	RNF44	Q7L0R7	432 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	PIWIL4	Q7Z3Z4	852 aa	Known RBP	23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	ANKMY2	Q8IV38	441 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	GPATCH11	Q8N954	259 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	FBXO36	Q8NEA4	188 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	ZNF480	Q8WV37	535 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	FKBP10	Q96AY3	582 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	CCDC138	Q96M89	665 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	ZNF285	Q96NJ3	590 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	TRIM54	Q9BYV2	358 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	RAB17	Q9H0T7	212 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	CUTC	Q9NTM9	273 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	ANAPC2	Q9UJX6	822 aa		23.17	■■□□□ 1.3
CNOT7-204	ENST00000518885	OR2A25	A4D2G3	310 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	FITM1	A5D6W6	292 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	KRT87P	A6NCN2	255 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	EIF3H	O15372	352 aa	Known RBP eCLIP	23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	EZR	P15311	586 aa	Known RBP	23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	CCND1	P24385	295 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	VSX2	P58304	361 aa	Predicted RBP	23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	CAV1	Q03135	178 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	CKAP4	Q07065	602 aa	Known RBP	23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	CBLB	Q13191	982 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	SSPN	Q14714	243 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	TCTN3	Q6NUS6	607 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	SLC26A11	Q86WA9	606 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	ZBED8	Q8IZ13	594 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	TMEM102	Q8N9M5	508 aa	Predicted RBP	23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	EEF1AKMT1	Q8WVE0	214 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	RERG	Q96A58	199 aa	Predicted RBP	23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	PLCD4	Q9BRC7	762 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	PARVB	Q9HBI1	364 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	CCDC177	Q9NQR7	707 aa	Predicted RBP	23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	TAC3	Q9UHF0	121 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	VWA7	Q9Y334	891 aa		23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	PTRH2	Q9Y3E5	179 aa	Known RBP	23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	GCN1	Q92616	2671 aa	Known RBP	23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885	FASN	P49327	2511 aa	Known RBP	23.16	■■□□□ 1.3
CNOT7-204	ENST00000518885		E7ENX8	843 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885		E7ESA3	106 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	PEX12	O00623	359 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	TXNDC9	O14530	226 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	CTSV	O60911	334 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	ALB	P02768	609 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	GABRB3	P28472	473 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	TAP2	Q03519	686 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	RELA	Q04206	551 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	WASHC2D	Q5SRD0	308 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	PAQR3	Q6TCH7	311 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	OR2Y1	Q8NGV0	311 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	ADAMTS17	Q8TE56	1095 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	PYROXD1	Q8WU10	500 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	NACC2	Q96BF6	587 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	LINGO1	Q96FE5	620 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	PWWP2A	Q96N64	755 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	ING2	Q9H160	280 aa		23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	ZNF71	Q9NQZ8	489 aa	Predicted RBP	23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885	NXT1	Q9UKK6	140 aa	Known RBP	23.15	■■□□□ 1.3
CNOT7-204	ENST00000518885		A0A0J9YVX5	310 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	ARGFX	A6NJG6	315 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	FANCG	O15287	622 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	PRPF4	O43172	522 aa	Known RBP eCLIP	23.14	■■□□□ 1.29	1e-8	■■■■□ 20.6
CNOT7-204	ENST00000518885	SUV39H1	O43463	412 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	KLHL41	O60662	606 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	ITGAX	P20702	1163 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	EMP3	P54852	163 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	CDKN2D	P55273	166 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	RBM20	Q5T481	1227 aa	Known RBP	23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	HECTD2	Q5U5R9	776 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	PRMT9	Q6P2P2	845 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	ADCK2	Q7Z695	626 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	CDKL2	Q92772	493 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	PTER	Q96BW5	349 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	VPS50	Q96JG6	964 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	FER1L6-AS2	Q96M78	137 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	DPH5	Q9H2P9	285 aa		23.14	■■□□□ 1.29
CNOT7-204	ENST00000518885	WDR54	Q9H977	334 aa		23.14	■■□□□ 1.29

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms