RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 GRIK2Q13002 908 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 RD3Q7Z3Z2 195 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 NET1Q7Z628 596 aaPredicted RBP22.59■■□□□ 1.21
SLIT3-204ENST00000518140 APLFQ8IW19 511 aaPredicted RBP22.59■■□□□ 1.21
SLIT3-204ENST00000518140 WDR20Q8TBZ3 569 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 RLN3Q8WXF3 142 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 C12orf66Q96MD2 445 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 MTERF1Q99551 399 aaKnown RBP22.59■■□□□ 1.21
SLIT3-204ENST00000518140 MENTQ9BUN1 341 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 PRDM8Q9NQV8 689 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 LRCH1Q9Y2L9 728 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 UGDHO60701 494 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 IGHV4-34P06331 123 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 PSME3P61289 254 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 PCDH1Q08174 1060 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 PTGR1Q14914 329 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 GRHL2Q6ISB3 625 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 IRGCQ6NXR0 463 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 TMPRSS11BQ86T26 416 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 FAM160A2Q8N612 972 aaPredicted RBP22.59■■□□□ 1.21
SLIT3-204ENST00000518140 DENND6BQ8NEG7 585 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 IL1RL2Q9HB29 575 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 C1orf109Q9NX04 203 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 ZIM2Q9NZV7 527 aa22.59■■□□□ 1.21
SLIT3-204ENST00000518140 OR52A4PA6NMU1 304 aa22.58■■□□□ 1.21
SLIT3-204ENST00000518140 CHURC1-FNTBB4DL54 471 aa22.58■■□□□ 1.21
SLIT3-204ENST00000518140 HOXC4P09017 264 aaPredicted RBP22.58■■□□□ 1.21
SLIT3-204ENST00000518140 KIAA1024LP59773 190 aa22.58■■□□□ 1.21
SLIT3-204ENST00000518140 DDX39BQ13838 428 aaKnown RBP22.58■■□□□ 1.21
SLIT3-204ENST00000518140 CEACAM7Q14002 265 aa22.58■■□□□ 1.21
SLIT3-204ENST00000518140 NFATC4Q14934 902 aa22.58■■□□□ 1.21
SLIT3-204ENST00000518140 C1orf146Q5VVC0 180 aa22.58■■□□□ 1.21
SLIT3-204ENST00000518140 ZFAND4Q86XD8 727 aa22.58■■□□□ 1.21
SLIT3-204ENST00000518140 APIPQ96GX9 242 aa22.58■■□□□ 1.21
SLIT3-204ENST00000518140 FERD3LQ96RJ6 166 aa22.58■■□□□ 1.21
SLIT3-204ENST00000518140 ACAT2Q9BWD1 397 aa22.58■■□□□ 1.21
SLIT3-204ENST00000518140 SCHIP1Q9P0W5 487 aaPredicted RBP22.58■■□□□ 1.21
SLIT3-204ENST00000518140 DPPA5A6NC42 116 aa22.58■■□□□ 1.2
SLIT3-204ENST00000518140 FAM170BA6NMN3 283 aa22.58■■□□□ 1.2
SLIT3-204ENST00000518140 EIF4E1BA6NMX2 242 aaKnown RBP22.58■■□□□ 1.2
SLIT3-204ENST00000518140 CIB2O75838 187 aa22.58■■□□□ 1.2
SLIT3-204ENST00000518140 POLR2JP52435 117 aaKnown RBP22.58■■□□□ 1.2
SLIT3-204ENST00000518140 THOP1P52888 689 aa22.58■■□□□ 1.2
SLIT3-204ENST00000518140 RCAN2Q14206 197 aa22.58■■□□□ 1.2
SLIT3-204ENST00000518140 BNC2Q6ZN30 1099 aaPredicted RBP22.58■■□□□ 1.2
SLIT3-204ENST00000518140 LIX1Q8N485 282 aa22.58■■□□□ 1.2
SLIT3-204ENST00000518140 TPSD1Q9BZJ3 242 aa22.58■■□□□ 1.2
SLIT3-204ENST00000518140 TRIT1Q9H3H1 467 aaKnown RBP22.58■■□□□ 1.2
SLIT3-204ENST00000518140 CCDC177Q9NQR7 707 aaPredicted RBP22.58■■□□□ 1.2
SLIT3-204ENST00000518140 IMP3Q9NV31 184 aaKnown RBP22.58■■□□□ 1.2
SLIT3-204ENST00000518140 POMPQ9Y244 141 aa22.58■■□□□ 1.2
SLIT3-204ENST00000518140 DLGAP4Q9Y2H0 992 aa22.58■■□□□ 1.2
SLIT3-204ENST00000518140 KLHL33A6NCF5 533 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 SH3BGRLO75368 114 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 IGLV3-19P01714 112 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 CASP2P42575 452 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 MEF2AQ02078 507 aaPredicted RBP22.57■■□□□ 1.2
SLIT3-204ENST00000518140 PRKCQQ04759 706 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 PIGGQ5H8A4 983 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 CCL4L1Q8NHW4 92 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 SPNS1Q9H2V7 528 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 LTB4R2Q9NPC1 389 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 GPRC5BQ9NZH0 403 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 NDUFAF1Q9Y375 327 aa22.57■■□□□ 1.2
SLIT3-204ENST00000518140 H0YIV9 168 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 EML2O95834 649 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 AK4P27144 223 aaPredicted RBP22.56■■□□□ 1.2
SLIT3-204ENST00000518140 HNF4AP41235 474 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 PXNP49023 591 aaPredicted RBP22.56■■□□□ 1.2
SLIT3-204ENST00000518140 ACTR3P61158 418 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 ZNF423Q2M1K9 1284 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 PAGE3Q5JUK9 113 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 THEMIS2Q5TEJ8 643 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 C8orf82Q6P1X6 216 aaPredicted RBP22.56■■□□□ 1.2
SLIT3-204ENST00000518140 TMEM145Q8NBT3 493 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 OR7G3Q8NG95 312 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 CLHC1Q8NHS4 586 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 OR2M4Q96R27 311 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 GPR174Q9BXC1 333 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 ANGPTL2Q9UKU9 493 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 PRPF19Q9UMS4 504 aaKnown RBP22.56■■□□□ 1.2
SLIT3-204ENST00000518140 EIF3LQ9Y262 564 aaKnown RBP22.56■■□□□ 1.2
SLIT3-204ENST00000518140 A0A1W2PP18 115 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 PDZK1P1A8MUH7 402 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 ANGPT2O15123 496 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 ETHE1O95571 254 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 ERGP11308 486 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 BCKDHAP12694 445 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 IDSP22304 550 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 DGKQP52824 942 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 KCNK10P57789 538 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 IRX1P78414 480 aaPredicted RBP22.56■■□□□ 1.2
SLIT3-204ENST00000518140 E2F2Q14209 437 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 TLR1Q15399 786 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 SF1Q15637 639 aaKnown RBP22.56■■□□□ 1.2
SLIT3-204ENST00000518140 TRMT5Q32P41 509 aaKnown RBP22.56■■□□□ 1.2
SLIT3-204ENST00000518140 TIGD2Q4W5G0 525 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 C6orf163Q5TEZ5 329 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 TBC1D21Q8IYX1 336 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 KRTCAP2Q8N6L1 136 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms