RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PAN3Q58A45 887 aaKnown RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TMEM31Q5JXX7 168 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 DNLZQ5SXM8 178 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC35F1Q5T1Q4 408 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 RIPPLY2Q5TAB7 128 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 FAM160B1Q5W0V3 765 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 EEF1DP3Q658K8 133 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ARHGAP17Q68EM7 881 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPR139Q6DWJ6 353 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC25A25Q6KCM7 469 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SCYL2Q6P3W7 929 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CASC4Q6P4E1 433 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 DPP8Q6V1X1 898 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF852Q6ZMS4 543 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 RASSF6Q6ZTQ3 369 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SPRED1Q7Z699 444 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 PRRT2Q7Z6L0 340 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 FJX1Q86VR8 437 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 DHFR2Q86XF0 187 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SKA3Q8IX90 412 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC35F3Q8IY50 421 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ENTHD1Q8IYW4 607 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC43A2Q8N370 569 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 C12orf45Q8N5I9 185 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CDYL2Q8N8U2 506 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CYGBQ8WWM9 190 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 NTAN1Q96AB6 310 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TCEAL4Q96EI5 215 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SIPA1Q96FS4 1042 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 KLHL15Q96M94 604 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 NSMCE2Q96MF7 247 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF778Q96MU6 729 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TEPSINQ96N21 525 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 LRFN5Q96NI6 719 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 NODALQ96S42 347 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 APOL2Q9BQE5 337 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 HERPUD2Q9BSE4 406 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 MYL10Q9BUA6 226 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TTLL2Q9BWV7 592 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TRIM9Q9C026 710 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF518BQ9C0D4 1074 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ILKAPQ9H0C8 392 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 METTL9Q9H1A3 318 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 GANQ9H2C0 597 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SEMA6AQ9H2E6 1030 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 OSGEPL1Q9H4B0 414 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 WDR26Q9H7D7 661 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 KAT8Q9H7Z6 458 aaKnown RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 NOL11Q9H8H0 719 aaKnown RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 MINDY3Q9H8M7 445 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 WDR41Q9HAD4 459 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 FOLH1BQ9HBA9 442 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 C3orf14Q9HBI5 128 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 RASSF1Q9NS23 344 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF275Q9NSD4 429 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 INTS10Q9NVR2 710 aaKnown RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 DUS2Q9NX74 493 aaKnown RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 BABAM2Q9NXR7 383 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SCN3BQ9NY72 215 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TREM2Q9NZC2 230 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 GDE1Q9NZC3 331 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 MPP6Q9NZW5 540 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TMEM181Q9P2C4 612 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 RCOR3Q9P2K3 495 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 UXTQ9UBK9 157 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF639Q9UID6 485 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 PURGQ9UJV8 347 aaKnown RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 OSGIN1Q9UJX0 560 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 FBXO10Q9UK96 956 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 EMC9Q9Y3B6 208 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 HSPB11Q9Y547 144 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 PCDHGB5Q9Y5G0 923 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 PCDHGA2Q9Y5H1 932 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 PIAS3Q9Y6X2 628 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 FPGT-TNNI3KV9GXZ4 949 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ATRNO75882 1429 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 USP6P35125 1406 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 MRC1P22897 1456 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CD163L1Q9NR16 1453 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 PCM1Q15154 2024 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 A0A1W2PPM1 405 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 hCG_1807616A0A1W2PRN6 198 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ARHGEF33A8MVX0 844 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 FOXO6A8MYZ6 492 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF879B4DU55 563 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 TOR1BO14657 336 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 FFAR3O14843 346 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 EPHB6O15197 1021 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SMAD6O43541 496 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PRPSAP2O60256 369 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SUSD5O60279 629 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 AGR2O95994 175 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MBP02144 154 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SERPINE1P05121 402 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 BPGMP07738 259 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CHRM5P08912 532 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 QDPRP09417 244 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 GNAO1P09471 354 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ADORA3P0DMS8 318 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CETPP11597 493 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms