RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 MDM1Q8TC05 714 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 GATA6Q92908 595 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 GRAMD1AQ96CP6 724 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 FCRL4Q96PJ5 515 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 OR6C1Q96RD1 312 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 TMEM79Q9BSE2 394 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 DPH7Q9BTV6 452 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 SGPP1Q9BX95 441 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 ROPN1BQ9BZX4 212 aaPredicted RBP9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 NRSN2Q9GZP1 204 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 SYNPO2LQ9H987 977 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 ROPN1Q9HAT0 212 aaPredicted RBP9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 MRPS30Q9NP92 439 aaKnown RBP9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 CCDC177Q9NQR7 707 aaPredicted RBP9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 ACSS2Q9NR19 701 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 FOXJ2Q9P0K8 574 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 AKAP7Q9P0M2 348 aaPredicted RBP9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 TMEM216Q9P0N5 145 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 CPSF2Q9P2I0 782 aaKnown RBP9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 B3GALT1Q9Y5Z6 326 aa9.35□□□□□ -0.91
SCARNA16-201ENST00000515981 ANKRD11Q6UB99 2663 aaPredicted RBP9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 FREM2Q5SZK8 3169 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 ZNF839A8K0R7 811 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 B4E171 279 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 C9orf172C9J069 976 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 H7BY64 318 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 CTSVO60911 334 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 KERAO60938 352 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 CDH16O75309 829 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 TIAF1O95411 115 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 STATHP02808 62 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 SBK3P0C264 359 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 COL6A2P12110 1019 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 CDH1P12830 882 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 RBMS1P29558 406 aaKnown RBP9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 CMPK1P30085 196 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 TSPAN7P41732 249 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 GABRA4P48169 554 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 CDKL1Q00532 357 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 PRDX1Q06830 199 aaKnown RBP9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 RASA2Q15283 850 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 KRT71Q3SY84 523 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 CATSPEREQ5SY80 951 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 CEP85LQ5SZL2 805 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 PRAMEF13Q5VWM6 474 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 CAPN13Q6MZZ7 669 aaPredicted RBP9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 FBXO42Q6P3S6 717 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 CCDC91Q7Z6B0 441 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 ZFAND4Q86XD8 727 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 DNAJC22Q8N4W6 341 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 OR1L3Q8NH93 324 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 ATL1Q8WXF7 558 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 SLC22A18Q96BI1 424 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 TSNARE1Q96NA8 513 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 SLC46A1Q96NT5 459 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 PRAP1Q96NZ9 151 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 TAAR9Q96RI9 348 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 TMEM109Q9BVC6 243 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 TMEM121BQ9BXQ6 578 aaPredicted RBP9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 SPRTNQ9H040 489 aaPredicted RBP9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 PDE7BQ9NP56 450 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 ASCL3Q9NQ33 180 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 STARD5Q9NSY2 213 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 WWOXQ9NZC7 414 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 XPR1Q9UBH6 696 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 LGALS13Q9UHV8 139 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 PTBP2Q9UKA9 531 aaKnown RBP9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 SLC22A14Q9Y267 594 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 BTRCQ9Y297 605 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 MAP1BP46821 2468 aaKnown RBP9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 DMXL2Q8TDJ6 3036 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 WDFY3Q8IZQ1 3526 aa9.34□□□□□ -0.91
SCARNA16-201ENST00000515981 MDC1Q14676 2089 aaKnown RBP9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 ASPMQ8IZT6 3477 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 LOC105369274A0A096LPK9 316 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 LOC102723532A0A0G2JNH3 316 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 A0A0J9YVX5 310 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 TMEM150CB9EJG8 249 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 TK2O00142 265 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 HAT1O14929 419 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 POLR1CO15160 346 aaPredicted RBP9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 SPAG7O75391 227 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 WDR47O94967 919 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 SIX3O95343 332 aaPredicted RBP9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 S100BP04271 92 aaPredicted RBP9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 RBP1P09455 135 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 ATXN8OSP0DMR3 200 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 ZNF28P17035 718 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 KRT4P19013 534 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 VARSP26640 1264 aaKnown RBP9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 SLC5A2P31639 672 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 MLLT3P42568 568 aaPredicted RBP9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 SLC6A12P48065 614 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 MEF2AQ02078 507 aaPredicted RBP9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 EIF3IQ13347 325 aaKnown RBP9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 TUBB3Q13509 450 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 PFKFB4Q16877 469 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 TMTC4Q5T4D3 741 aa9.33□□□□□ -0.92
SCARNA16-201ENST00000515981 SULT1C3Q6IMI6 304 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms