RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 UAP1L1Q3KQV9 507 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 PRAMEF14Q5SWL7 426 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 C10orf62Q5T681 223 aaPredicted RBP19.46■□□□□ 0.71
TRIO-223ENST00000515710 PRAMEF13Q5VWM6 474 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 BNC2Q6ZN30 1099 aaPredicted RBP19.46■□□□□ 0.71
TRIO-223ENST00000515710 PROKR1Q8TCW9 393 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 SPDL1Q96EA4 605 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 IL17FQ96PD4 163 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 MVB12BQ9H7P6 319 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 EBF2Q9HAK2 575 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 SLC52A3Q9NQ40 469 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 TMED5Q9Y3A6 229 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 NUMA1Q14980 2115 aa19.46■□□□□ 0.71
TRIO-223ENST00000515710 RABIFP47224 123 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 POLR2JP52435 117 aaKnown RBP19.45■□□□□ 0.7
TRIO-223ENST00000515710 THOP1P52888 689 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 ZP2Q05996 745 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 RCAN2Q14206 197 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 KPNB1Q14974 876 aaKnown RBP19.45■□□□□ 0.7
TRIO-223ENST00000515710 KIAA0040Q15053 153 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 PAGE2BQ5JRK9 111 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 THEMIS2Q5TEJ8 643 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 MED27Q6P2C8 311 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 SUSD1Q6UWL2 747 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 ABI3BPQ7Z7G0 1075 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 TMPRSS11BQ86T26 416 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 FAM9CQ8IZT9 166 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 SLC5A11Q8WWX8 675 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 CDRT15Q96T59 188 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 PCBD2Q9H0N5 130 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 BRF2Q9HAW0 419 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 PLAGL1Q9UM63 463 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 A0A1W2PP18 115 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 PDZK1P1A8MUH7 402 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 LMNAP02545 664 aaKnown RBP19.45■□□□□ 0.7
TRIO-223ENST00000515710 ACPPP15309 386 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 CAPN3P20807 821 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 MAPK1P28482 360 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 ZFP36L2P47974 494 aaKnown RBP19.45■□□□□ 0.7
TRIO-223ENST00000515710 PSME3P61289 254 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 CLCA4Q14CN2 919 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 HIST2H2ACQ16777 129 aaPredicted RBP19.45■□□□□ 0.7
TRIO-223ENST00000515710 VPS26BQ4G0F5 336 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 HIST2H2AA3Q6FI13 130 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 NXPE4Q6UWF7 544 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 WASH2PQ6VEQ5 465 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 WDR60Q8WVS4 1066 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 SMPDL3AQ92484 453 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 METTL2AQ96IZ6 378 aaKnown RBP19.45■□□□□ 0.7
TRIO-223ENST00000515710 TEX37Q96LM6 180 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 HHIPQ96QV1 700 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 MENTQ9BUN1 341 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 WASH6PQ9NQA3 447 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 C2orf42Q9NWW7 574 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 CROTQ9UKG9 612 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 HEBP2Q9Y5Z4 205 aa19.45■□□□□ 0.7
TRIO-223ENST00000515710 ANKRD28O15084 1053 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 CFLARO15519 480 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 PRPS2P11908 318 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 JAK1P23458 1154 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 VARSP26640 1264 aaKnown RBP19.44■□□□□ 0.7
TRIO-223ENST00000515710 KRT33BQ14525 404 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 Q6ZSR6 202 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 PDXPQ96GD0 296 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 CAMK1GQ96NX5 476 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 GPR174Q9BXC1 333 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 RAB11FIP5Q9BXF6 653 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 FOXQ1Q9C009 403 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 IMP3Q9NV31 184 aaKnown RBP19.44■□□□□ 0.7
TRIO-223ENST00000515710 SPATA6Q9NWH7 488 aaPredicted RBP19.44■□□□□ 0.7
TRIO-223ENST00000515710 GID8Q9NWU2 228 aa19.44■□□□□ 0.7
TRIO-223ENST00000515710 CCDC154A6NI56 674 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 SRP54P61011 504 aaKnown RBP19.43■□□□□ 0.7
TRIO-223ENST00000515710 USP39Q53GS9 565 aaKnown RBP19.43■□□□□ 0.7
TRIO-223ENST00000515710 CATSPEREQ5SY80 951 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 TPRG1LQ5T0D9 272 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 C1orf146Q5VVC0 180 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 ABRAXAS1Q6UWZ7 409 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 SIX5Q8N196 739 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 GLB1L3Q8NCI6 653 aaPredicted RBP19.43■□□□□ 0.7
TRIO-223ENST00000515710 OR7G3Q8NG95 312 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 FAM174AQ8TBP5 190 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 BIRC7Q96CA5 298 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 ZBTB18Q99592 522 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 HOPXQ9BPY8 73 aaPredicted RBP19.43■□□□□ 0.7
TRIO-223ENST00000515710 MAP10Q9P2G4 905 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 VPS29Q9UBQ0 182 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 LEF1Q9UJU2 399 aaPredicted RBP19.43■□□□□ 0.7
TRIO-223ENST00000515710 PCDHGA7Q9Y5G6 932 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 KDM1AO60341 852 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 ENTPD5O75356 428 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 IL12AP29459 219 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 RPE65Q16518 533 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 DUS1LQ6P1R4 473 aaKnown RBP19.43■□□□□ 0.7
TRIO-223ENST00000515710 C8orf82Q6P1X6 216 aaPredicted RBP19.43■□□□□ 0.7
TRIO-223ENST00000515710 RETREG3Q86VR2 466 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 LAS2Q8IYD9 372 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 LIX1Q8N485 282 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 LMNTD1Q8N9Z9 388 aa19.43■□□□□ 0.7
TRIO-223ENST00000515710 UBE2E3Q969T4 207 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms