RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	PCDHA13	Q9Y5I0	950 aa		15.01	□□□□□ -0.01
LMNA-223	ENST00000515459	KLK4	Q9Y5K2	254 aa		15.01	□□□□□ -0.01
LMNA-223	ENST00000515459	PKDREJ	Q9NTG1	2253 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	IGHV1-45	A0A0A0MS14	117 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459		A0A1W2PQ72	361 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	IQCF5	A8MTL0	148 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	IDS	B3KWA1	339 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	AKR1B15	C9JRZ8	316 aa	Predicted RBP	15	□□□□□ -0.01
LMNA-223	ENST00000515459	KRT38	O76015	456 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	SLCO2B1	O94956	709 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	GAS8	O95995	478 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	GOT2	P00505	430 aa	Known RBP	15	□□□□□ -0.01
LMNA-223	ENST00000515459	MYBL2	P10244	700 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	MST1	P26927	711 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	PSMB5	P28074	263 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	EMP2	P54851	167 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	EEF1A2	Q05639	463 aa	Known RBP	15	□□□□□ -0.01
LMNA-223	ENST00000515459	RBPJ	Q06330	500 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	TMED2	Q15363	201 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	AADACL2	Q6P093	401 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	XKRX	Q6PP77	449 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	RNF44	Q7L0R7	432 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	RAB42	Q8N4Z0	105 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	DNAAF3	Q8N9W5	541 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	OR2L3	Q8NG85	312 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	OR4L1	Q8NH43	312 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	LKAAEAR1	Q8TD35	194 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	MIPEP	Q99797	713 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	TRIM8	Q9BZR9	551 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	RNF32	Q9H0A6	362 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	RIC8B	Q9NVN3	520 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	STOX2	Q9P2F5	926 aa	Predicted RBP	15	□□□□□ -0.01
LMNA-223	ENST00000515459	ITGB1BP2	Q9UKP3	347 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	CDC14A	Q9UNH5	594 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	MRFAP1	Q9Y605	127 aa		15	□□□□□ -0.01
LMNA-223	ENST00000515459	PRPF4	O43172	522 aa	Known RBP eCLIP	14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	NRP2	O60462	931 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	WDPCP	O95876	746 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	ERVK-10	P10266	1014 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	AOAH	P28039	575 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	CASP6	P55212	293 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	AP2B1	P63010	937 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	CDH17	Q12864	832 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	SPA17	Q15506	151 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	FASTKD1	Q53R41	847 aa	Known RBP	14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	HIBCH	Q6NVY1	386 aa	Predicted RBP	14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	TAB3	Q8N5C8	712 aa	Predicted RBP	14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	OR52K1	Q8NGK4	314 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	OR6P1	Q8NGX9	317 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	GSDMB	Q8TAX9	411 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	HMGCLL1	Q8TB92	370 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	MRFAP1L1	Q96HT8	127 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	CABS1	Q96KC9	395 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	C10orf90	Q96M02	699 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	YIPF2	Q9BWQ6	316 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	C14orf105	Q9NVL8	296 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	TRPC4	Q9UBN4	977 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	SLC2A6	Q9UGQ3	507 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	RIMKLB	Q9ULI2	386 aa		14.99	□□□□□ -0.01
LMNA-223	ENST00000515459	ADGRG4	Q8IZF6	3080 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	OR5H15	A6NDH6	313 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	GOLGA6L9	A6NEM1	432 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	C1orf105	O95561	183 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	PTMA	P06454	111 aa	Known RBP	14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	HEXB	P07686	556 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	CELA2A	P08217	269 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	ICAM2	P13598	275 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	EMP3	P54852	163 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	GDF10	P55107	478 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	PRAME	P78395	509 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	SRSF11	Q05519	484 aa	Known RBP	14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	DSG2	Q14126	1118 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	SEMA3A	Q14563	771 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	NAA25	Q14CX7	972 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	TSTD2	Q5T7W7	516 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	ABHD17B	Q5VST6	288 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	FAAH2	Q6GMR7	532 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	ZNF534	Q76KX8	674 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	KRT222	Q8N1A0	295 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	OR2A1	Q8NGT9	310 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	SKA2	Q8WVK7	121 aa	Predicted RBP	14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	ALG3	Q92685	438 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	MVB12A	Q96EY5	273 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	CALR3	Q96L12	384 aa	Known RBP	14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	ZFYVE21	Q9BQ24	234 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	ANAPC5	Q9UJX4	755 aa		14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	TTC7A	Q9ULT0	858 aa	Predicted RBP	14.98	□□□□□ -0.01
LMNA-223	ENST00000515459	OR2A25	A4D2G3	310 aa		14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	ERI2	A8K979	691 aa	Known RBP	14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	SLC19A2	O60779	497 aa		14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	PRAMEF2	O60811	474 aa		14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	ITGAM	P11215	1152 aa		14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	ESRRA	P11474	423 aa	Predicted RBP	14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	AGA	P20933	346 aa		14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	BDKRB1	P46663	353 aa		14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	ACVR1	Q04771	509 aa		14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	PRTG	Q2VWP7	1150 aa		14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	CCSMST1	Q4G0I0	132 aa		14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	AARS2	Q5JTZ9	985 aa	Known RBP	14.97	□□□□□ -0.01
LMNA-223	ENST00000515459	ZNF295-AS1	Q8N0V1	137 aa		14.97	□□□□□ -0.01

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