RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 KATNA1O75449 491 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 CAPN1P07384 714 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 ENO2P09104 434 aaPredicted RBP12.26□□□□□ -0.45
CLCN3-210ENST00000515420 PRKAR1AP10644 381 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 ZNF37AP17032 561 aaPredicted RBP12.26□□□□□ -0.45
CLCN3-210ENST00000515420 CCND1P24385 295 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 HRH2P25021 359 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 IMPA1P29218 277 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 CCR10P46092 362 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 AP1S2P56377 157 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 GRM7Q14831 915 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 UGT8Q16880 541 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 ICE2Q659A1 982 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 FAM199XQ6PEV8 388 aaPredicted RBP12.26□□□□□ -0.45
CLCN3-210ENST00000515420 STRA8Q7Z7C7 330 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 FAM20CQ8IXL6 584 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 MMGT1Q8N4V1 131 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 APOBEC4Q8WW27 367 aaKnown RBP12.26□□□□□ -0.45
CLCN3-210ENST00000515420 RNF31Q96EP0 1072 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 LINGO1Q96FE5 620 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 VPS39Q96JC1 886 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 GBP5Q96PP8 586 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 ZFYVE21Q9BQ24 234 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 PLCD4Q9BRC7 762 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 DPH7Q9BTV6 452 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 NDC1Q9BTX1 674 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 SPRTNQ9H040 489 aaPredicted RBP12.26□□□□□ -0.45
CLCN3-210ENST00000515420 PCBD2Q9H0N5 130 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 POPDC3Q9HBV1 291 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 TXLNGQ9NUQ3 528 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 GEMIN8Q9NWZ8 242 aaKnown RBP12.26□□□□□ -0.45
CLCN3-210ENST00000515420 TAC3Q9UHF0 121 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 PDE10AQ9Y233 779 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 POLHQ9Y253 713 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 KLHL20Q9Y2M5 609 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 PIEZO2Q9H5I5 2752 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 FAM95CA0A1B0GW59 222 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 A0A1B0GX78 115 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 TCRBV9S1A1TA0A576 114 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 FAM159BA6NKW6 160 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 CTSVO60911 334 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 SYF2O95926 243 aaKnown RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 ONECUT2O95948 504 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 HIST1H2AGP0C0S8 130 aaPredicted RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 EZRP15311 586 aaKnown RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 HIST1H2ADP20671 130 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 SSTR1P30872 391 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 EMP3P54852 163 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 DCDP81605 110 aaKnown RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 LY6DQ14210 128 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 NCF4Q15080 339 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 FAM214AQ32MH5 1076 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 ZNF425Q6IV72 752 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 C16orf46Q6P387 395 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 SUSD1Q6UWL2 747 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 ZDHHC24Q6UX98 284 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 NKAPQ8N5F7 415 aaKnown RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 ZNF655Q8N720 491 aaPredicted RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 ENDOVQ8N8Q3 282 aaKnown RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 EXD3Q8N9H8 876 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 TTC29Q8NA56 475 aaPredicted RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 THAP4Q8WY91 577 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 TRIM44Q96DX7 344 aaPredicted RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 HIST1H2AHQ96KK5 128 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 OLFM1Q99784 485 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 CPNE1Q99829 537 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 HIST1H2AJQ99878 128 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 SELENOSQ9BQE4 189 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 H2AFJQ9BTM1 129 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 TRIM54Q9BYV2 358 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 SLC6A20Q9NP91 592 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 CCDC177Q9NQR7 707 aaPredicted RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 IRAK4Q9NWZ3 460 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 STOX2Q9P2F5 926 aaPredicted RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 TXNDC16Q9P2K2 825 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 TCFL5Q9UL49 500 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 SNX7Q9UNH6 387 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 NOVA2Q9UNW9 492 aaKnown RBP12.25□□□□□ -0.45
CLCN3-210ENST00000515420 PADI2Q9Y2J8 665 aa12.25□□□□□ -0.45
CLCN3-210ENST00000515420 PABPN1LA6NDY0 278 aaKnown RBP12.24□□□□□ -0.45
CLCN3-210ENST00000515420 DSCR3O14972 297 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 C1QL1O75973 258 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 STX2P32856 288 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 MAGEA4P43358 317 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 POLE2P56282 527 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 TBPL1P62380 186 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 POU4F1Q01851 419 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 C19orf57Q0VDD7 668 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 NAB1Q13506 487 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 ERV3-1Q14264 604 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 PTCHD3Q3KNS1 767 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 GLE1Q53GS7 698 aaKnown RBP12.24□□□□□ -0.45
CLCN3-210ENST00000515420 LCN10Q6JVE6 187 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 CEP128Q6ZU80 1094 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 C3orf62Q6ZUJ4 267 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 PAQR7Q86WK9 346 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 KIF18AQ8NI77 898 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 ATL1Q8WXF7 558 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 ZNF592Q92610 1267 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 FKBP10Q96AY3 582 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms