RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CNPP09543 421 aaKnown RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 IFI30P13284 250 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 NPR3P17342 541 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 ATF4P18848 351 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 OGNP20774 298 aaKnown RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 CXCR3P49682 368 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 CLCN3P51790 818 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 TIAL1Q01085 375 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 MRPL28Q13084 256 aaKnown RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 GLYR1Q49A26 553 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 SOWAHCQ53LP3 525 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 PDZK1Q5T2W1 519 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 LAMTOR1Q6IAA8 161 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 GCNT7Q6ZNI0 430 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 KDELC2Q7Z4H8 507 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 ZNF605Q86T29 641 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 MSRB3Q8IXL7 192 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 ZZZ3Q8IYH5 903 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 COQ8BQ96D53 544 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 ASIC4Q96FT7 647 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 AARSD1Q9BTE6 412 aaKnown RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 SPATA9Q9BWV2 254 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 CDCA4Q9BXL8 241 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 SLC25A51Q9H1U9 297 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 SYNDIG1Q9H7V2 258 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 REEP1Q9H902 201 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 DDIT4Q9NX09 232 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 SLC25A37Q9NYZ2 338 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 CRYL1Q9Y2S2 319 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 SAMHD1Q9Y3Z3 626 aaKnown RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 TNPO3Q9Y5L0 923 aaKnown RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 YKT6O15498 198 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 AKR7A2O43488 359 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 CYP7B1O75881 506 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 C9P02748 559 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 HLA-DQB2P05538 268 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 ITGB1P05556 798 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 ATF6P18850 670 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 TNNI3P19429 210 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 PRDX3P30048 256 aaKnown RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 KCNQ1P51787 676 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 S100A12P80511 92 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 NR6A1Q15406 480 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 TAB1Q15750 504 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 MZT2BQ6NZ67 158 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 CCDC149Q6ZUS6 474 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 NKAPQ8N5F7 415 aaKnown RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 OR4M2Q8NGB6 313 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 OR8H1Q8NGG4 311 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 UBE2FQ969M7 185 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 PMEPA1Q969W9 287 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 ZNF668Q96K58 619 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 EPYCQ99645 322 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 CPPED1Q9BRF8 314 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 TSEN34Q9BSV6 310 aaKnown RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 ASPNQ9BXN1 380 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 HDHD5Q9BXW7 423 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 IKZF5Q9H5V7 419 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 PGAP2Q9UHJ9 254 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 PHF11Q9UIL8 331 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 ELF5Q9UKW6 265 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 ABCG2Q9UNQ0 655 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 POLR3HQ9Y535 204 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 A0A0B4J203 849 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 A0A0B4J293 547 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 SLC12A8A0AV02 714 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 HBP1O60381 514 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 RFPL3O75679 317 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 OR4F21O95013 312 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 PTHP01270 115 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 SEMG1P04279 462 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 IFNA16P05015 189 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 ARF4P18085 180 aaPredicted RBP12.46□□□□□ -0.41
SMAD1-215ENST00000515385 WARSP23381 471 aaKnown RBP12.46□□□□□ -0.41
SMAD1-215ENST00000515385 DAB2P98082 770 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 ACVR1Q04771 509 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 RGS1Q08116 209 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 TATDN3Q17R31 274 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 AP5B1Q2VPB7 878 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 FAM214AQ32MH5 1076 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 TTLL9Q3SXZ7 439 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 LCN1P1Q5VSP4 162 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 FIP1L1Q6UN15 594 aaKnown RBP12.46□□□□□ -0.41
SMAD1-215ENST00000515385 ATCAYQ86WG3 371 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 ARHGAP12Q8IWW6 846 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 TRIM48Q8IWZ4 208 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 GPALPP1Q8IXQ4 340 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 TMEM132CQ8N3T6 1108 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 C1orf52Q8N6N3 182 aaKnown RBP12.46□□□□□ -0.41
SMAD1-215ENST00000515385 C2orf69Q8N8R5 385 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 RNF31Q96EP0 1072 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 TOE1Q96GM8 510 aaKnown RBP12.46□□□□□ -0.41
SMAD1-215ENST00000515385 GPR137Q96N19 417 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 MGLLQ99685 303 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 KATNAL1Q9BW62 490 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 ATXN3LQ9H3M9 355 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 MIOSQ9NXC5 875 aa12.46□□□□□ -0.41
SMAD1-215ENST00000515385 MARCH4Q9P2E8 410 aaPredicted RBP12.46□□□□□ -0.41
SMAD1-215ENST00000515385 ATP6V1HQ9UI12 483 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms