RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 HTR3EA5X5Y0 456 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 SNX3O60493 162 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 RPS6KA5O75582 802 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 BAG3O95817 575 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 IGKV3-20P01619 116 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 GNB3P16520 340 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 LBPP18428 481 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 TCEA1P23193 301 aaKnown RBP4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 CHRNB4P30926 498 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 CSTF2P33240 577 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 HSD17B3P37058 310 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 KLC1Q07866 573 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 BFSP1Q12934 665 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 ZNF876PQ49A33 203 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 SLC35D3Q5M8T2 416 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 FFAR4Q5NUL3 377 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 C20orf194Q5TEA3 1177 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 MOXD1Q6UVY6 613 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 KIRREL3Q8IZU9 778 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 APCDD1Q8J025 514 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 OR8H3Q8N146 312 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 GOT1L1Q8NHS2 421 aaPredicted RBP4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 FAM76AQ8TAV0 307 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 TMEM190Q8WZ59 177 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 RAD54LQ92698 747 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 CORO2AQ92828 525 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 GIMAP5Q96F15 307 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 MAP3K3Q99759 626 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 THUMPD3Q9BV44 507 aaKnown RBP4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 ZMYND12Q9H0C1 365 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 DNAJB9Q9UBS3 223 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 GAB2Q9UQC2 676 aa4.58□□□□□ -1.68
HMGCS1-207ENST00000514610 FPGTO14772 594 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 PRAF2O60831 178 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 PLGP00747 810 aaPredicted RBP4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 GP1BBP13224 206 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 PSMB4P28070 264 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 TIA1P31483 386 aaKnown RBP eCLIP4.57□□□□□ -1.685e-7■■■■■ 32.2
HMGCS1-207ENST00000514610 RGS7P49802 495 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 TNK1Q13470 666 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 ALDH1L2Q3SY69 923 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 FAM174BQ3ZCQ3 159 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 GPR33Q49SQ1 333 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 CCDC184Q52MB2 194 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 ZRANB3Q5FWF4 1079 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 XKR6Q5GH73 641 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 SHEQ5VZ18 495 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 UGT3A1Q6NUS8 523 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 PET117Q6UWS5 81 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 ANKRD33Q7Z3H0 272 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 NRARPQ7Z6K4 114 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 ANKRD23Q86SG2 305 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 NDUFAF2Q8N183 169 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 RYBPQ8N488 228 aaPredicted RBP4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 FAM162AQ96A26 154 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 INPP5KQ9BT40 448 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 THAP2Q9H0W7 228 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 ATP13A3Q9H7F0 1226 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 LMAN1LQ9HAT1 526 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 KCNK7Q9Y2U2 307 aa4.57□□□□□ -1.68
HMGCS1-207ENST00000514610 DISP3Q9P2K9 1392 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 C5orf52A6NGY3 159 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 MSGN1A6NI15 193 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 O00370 1275 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 CDC123O75794 336 aaPredicted RBP4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 EML2O95834 649 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 APOHP02749 345 aaPredicted RBP4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 SERPING1P05155 500 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 CEACAM1P13688 526 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 ALDH1B1P30837 517 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 MAGEA11P43364 429 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 MFAP3P55082 362 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 SP3Q02447 781 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 ILF2Q12905 390 aaKnown RBP4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 RRS1Q15050 365 aaKnown RBP4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 EXT1Q16394 746 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 LRRC73Q5JTD7 316 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 TMEM207Q6UWW9 146 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 Q6ZTC4 211 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 SPATA21Q7Z572 469 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 OR13C3Q8NGS6 347 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 EXOC4Q96A65 974 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 LGALS12Q96DT0 336 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 LITAFQ99732 161 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 CITED2Q99967 270 aaPredicted RBP4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 PHPT1Q9NRX4 125 aaPredicted RBP4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 DDX43Q9NXZ2 648 aaKnown RBP4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 GTF3C4Q9UKN8 822 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 PPP2R2CQ9Y2T4 447 aa4.56□□□□□ -1.68
HMGCS1-207ENST00000514610 TRBV5-5A0A0J9YX44 114 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 A0A1W2PPW3 197 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 AP2A2O94973 939 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 MOCS3O95396 460 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 SPP1P10451 314 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 LHCGRP22888 699 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 HERV-K104P61576 105 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 POU5F1Q01860 360 aaKnown RBP4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 RBM39Q14498 530 aaKnown RBP4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 LYSMD4Q5XG99 296 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms