RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 DCAF10Q5QP82 559 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 WASHC2DQ5SRD0 308 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 VWA5B1Q5TIE3 1220 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 SUSD1Q6UWL2 747 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 OVCH1Q7RTY7 1134 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 KCNMB4Q86W47 210 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 SPNS2Q8IVW8 549 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 LRRC56Q8IYG6 542 aaPredicted RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 CLEC1AQ8NC01 280 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 SERBP1Q8NC51 408 aaKnown RBP eCLIP10□□□□□ -0.81
HMGXB3-205ENST00000514469 ZNF480Q8WV37 535 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 ZDHHC19Q8WVZ1 309 aaPredicted RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 ASB11Q8WXH4 323 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 NACC2Q96BF6 587 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 C10orf90Q96M02 699 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 PKP4Q99569 1192 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 GPR21Q99679 349 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 ZFYVE21Q9BQ24 234 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 PLCD4Q9BRC7 762 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 AARSD1Q9BTE6 412 aaKnown RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 DPH7Q9BTV6 452 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 DDX47Q9H0S4 455 aaKnown RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 CCDC68Q9H2F9 335 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 SYNPO2LQ9H987 977 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 MRPS30Q9NP92 439 aaKnown RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 P4HTMQ9NXG6 502 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 TRMT1Q9NXH9 659 aaKnown RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 CTSFQ9UBX1 484 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 ASIC3Q9UHC3 531 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 TAC3Q9UHF0 121 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 PCYOX1Q9UHG3 505 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 NXT1Q9UKK6 140 aaKnown RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 FBXO5Q9UKT4 447 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 DHRS7Q9Y394 339 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 HECTD1Q9ULT8 2610 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 LOC105369274A0A096LPK9 316 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 LOC102723532A0A0G2JNH3 316 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 HYKKA2RU49 373 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 A6NL46 340 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 VSTM2BA6NLU5 285 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 E7ENX8 843 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 GFYI3L273 518 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 AGPSO00116 658 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 PEX12O00623 359 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 SOCS6O14544 535 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 VPS26AO75436 327 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 BANF1O75531 89 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 HAUS5O94927 633 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 CCNDBP1O95273 360 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 TTC4O95801 387 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 TCP1P17987 556 aaKnown RBP9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 MMP11P24347 488 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 SKIV2L2P42285 1042 aaKnown RBP9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 SOX8P57073 446 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 TAP2Q03519 686 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 DHX9Q08211 1270 aaKnown RBP9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 RAPSNQ13702 412 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 MYBPC3Q14896 1274 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 PRTGQ2VWP7 1150 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 FAM214AQ32MH5 1076 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 HSP90AA5PQ58FG0 334 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 ICE2Q659A1 982 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 SLC6A19Q695T7 634 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 ZNF425Q6IV72 752 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 JMJD6Q6NYC1 403 aaPredicted RBP9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 PRMT9Q6P2P2 845 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 CYHR1Q6ZMK1 362 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 ATCAYQ86WG3 371 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 PAQR7Q86WK9 346 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 CNTN4Q8IWV2 1026 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 CPNE9Q8IYJ1 553 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 OR4N4Q8N0Y3 316 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 GALNT16Q8N428 558 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 DTWD1Q8N5C7 304 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 METTL27Q8N6F8 245 aaPredicted RBP9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 RBMXL3Q8N7X1 1067 aaKnown RBP9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 Q8NA96 180 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 C2CD4AQ8NCU7 369 aaPredicted RBP9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 PPFIBP2Q8ND30 876 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 CPT1CQ8TCG5 803 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 INPP5DQ92835 1189 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 EBNA1BP2Q99848 306 aaKnown RBP9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 ACAT2Q9BWD1 397 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 IARS2Q9NSE4 1012 aaKnown RBP9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 C5AR2Q9P296 337 aa9.99□□□□□ -0.81
HMGXB3-205ENST00000514469 SNRNP200O75643 2136 aaKnown RBP9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 NUP210LQ5VU65 1888 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 TNRC6AQ8NDV7 1962 aaKnown RBP9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 USP27XA6NNY8 438 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 TTLL8A6PVC2 850 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 MASP2O00187 686 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 SMAPO00193 183 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 ERVK-10P10266 1014 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 EZRP15311 586 aaKnown RBP9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 IVDP26440 423 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 IMPA1P29218 277 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 OR1D4P47884 311 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 EMP3P54852 163 aa9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 TIAL1Q01085 375 aaKnown RBP eCLIP9.98□□□□□ -0.81
HMGXB3-205ENST00000514469 PRDX1Q06830 199 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms