RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 ZNF582Q96NG8 517 aaPredicted RBP3.86□□□□□ -1.79
GYPB-214ENST00000513557 CAMK1GQ96NX5 476 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 SLC29A3Q9BZD2 475 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 RAB6CQ9H0N0 254 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 LRMDAQ9H2I8 198 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 DPAGT1Q9H3H5 408 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 SLA2Q9H6Q3 261 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 ZNF224Q9NZL3 707 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 ACTR3BQ9P1U1 418 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 KLHL9Q9P2J3 617 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 SIX4Q9UIU6 781 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 CDH7Q9ULB5 785 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 NIP7Q9Y221 180 aaKnown RBP eCLIP3.86□□□□□ -1.79
GYPB-214ENST00000513557 YIPF1Q9Y548 306 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 TRIM17Q9Y577 477 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 USP16Q9Y5T5 823 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 AP1M2Q9Y6Q5 423 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 CKAP5Q14008 2032 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 QSER1Q2KHR3 1735 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 CARMIL3Q8ND23 1372 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 C10orf71Q711Q0 1435 aa3.86□□□□□ -1.79
GYPB-214ENST00000513557 C4AP0C0L4 1744 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 HTR3EA5X5Y0 456 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 OOEPA6NGQ2 149 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 LILRA5A6NI73 299 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 ANKRD66B4E2M5 251 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 SLC33A1O00400 549 aaPredicted RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 MEIS2O14770 477 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 BUD23O43709 281 aaKnown RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 SOCS5O75159 536 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 HEXBP07686 556 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 OR2T7P0C7T2 308 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 PDGFRAP16234 1089 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 POLR2CP19387 275 aaPredicted RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 PPP2R1AP30153 589 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 HOXA11P31270 313 aaPredicted RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 PRKCIP41743 596 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 SLC9A3P48764 834 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 TDO2P48775 406 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 MRPS21P82921 87 aaKnown RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 AKAP17AQ02040 695 aaKnown RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 KLHL30Q0D2K2 578 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 TROAPQ12815 778 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 MYBPHQ13203 477 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 INAQ16352 499 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 FUT11Q495W5 492 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 SFMBT2Q5VUG0 894 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 ETFRF1Q6IPR1 90 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 ZNF425Q6IV72 752 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 PRR5LQ6MZQ0 368 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 TRNP1Q6NT89 227 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 DPY19L2P1Q6NXN4 242 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 RHBDF2Q6PJF5 856 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 KDELC1Q6UW63 502 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 SPATA19Q7Z5L4 167 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 RABEPKQ7Z6M1 372 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 HOOK3Q86VS8 718 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 TBC1D21Q8IYX1 336 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 SYCP3Q8IZU3 236 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 C1orf87Q8N0U7 546 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 CLIP4Q8N3C7 705 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 GBGT1Q8N5D6 347 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 RTL3Q8N8U3 475 aaKnown RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 ZNF540Q8NDQ6 660 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 DENND6BQ8NEG7 585 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 SPATA22Q8NHS9 363 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 TMEM255BQ8WV15 326 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 TMED6Q8WW62 240 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 ZNF606Q8WXB4 792 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 SMPDL3BQ92485 455 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 EXT2Q93063 718 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 SYAP1Q96A49 352 aaPredicted RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 PHF21AQ96BD5 680 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 TRIM44Q96DX7 344 aaPredicted RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 RBM18Q96H35 190 aaKnown RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 TMEM19Q96HH6 336 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 VPS39Q96JC1 886 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 FAM84BQ96KN1 310 aaPredicted RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 SFXN2Q96NB2 322 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 LRRC3BQ96PB8 259 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 TAS2R3Q9NYW6 316 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 SMARCAL1Q9NZC9 954 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 ARMCX3Q9UH62 379 aaPredicted RBP3.85□□□□□ -1.79
GYPB-214ENST00000513557 CHKBQ9Y259 395 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 NME7Q9Y5B8 376 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 MAPK8IP3Q9UPT6 1336 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 NCAPD2Q15021 1401 aa3.85□□□□□ -1.79
GYPB-214ENST00000513557 ANKRD26Q9UPS8 1709 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 IGLV5-37A0A075B6J1 123 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 FEZF1A0PJY2 475 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 ENO4A6NNW6 628 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 C15orf62A8K5M9 175 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 CLDN4O14493 209 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 DVL1O14640 695 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 CLIC2O15247 247 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 GPR137BO60478 399 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 RAB40ALP0C0E4 278 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 LINC00271P0C7V0 271 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 MYOD1P15172 320 aa3.84□□□□□ -1.79
GYPB-214ENST00000513557 PTPN3P26045 913 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms