RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ASPNQ9BXN1 380 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 BCO2Q9BYV7 579 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 DEC1Q9P2X7 70 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 QSOX1O00391 747 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 CDRT1O95170 752 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 CHRNB1P11230 501 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 RHOQP17081 205 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 DSC3Q14574 896 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 MPPE1Q53F39 396 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 PXYLP1Q8TE99 480 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 NTAN1Q96AB6 310 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 SCLYQ96I15 445 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 ERVK13-1Q9NX77 482 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 GALPQ9UBC7 116 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 SPIN1Q9Y657 262 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-211ENST00000513346 HSPE1-MOB4S4R3N1 261 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 MYH11P35749 1972 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 INMT-MINDY4F8WBC2 141 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 B4GAT1O43505 415 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 NDST3O95803 873 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 TCEA2Q15560 299 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 PARP15Q460N3 678 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 XKR6Q5GH73 641 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 DCST1Q5T197 706 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 GCNT6Q5T4J0 391 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 BLOC1S3Q6QNY0 202 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 GPR156Q8NFN8 814 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 CNDP2Q96KP4 475 aaKnown RBP10.98□□□□□ -0.65
TCOF1-211ENST00000513346 ZNF607Q96SK3 696 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 C11orf16Q9NQ32 467 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.98□□□□□ -0.654e-6■□□□□ 11.1
TCOF1-211ENST00000513346 POLR3BQ9NW08 1133 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-211ENST00000513346 PCDH10Q9P2E7 1040 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 NDOR1Q9UHB4 597 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 PCDHB1Q9Y5F3 818 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 STYXL1Q9Y6J8 313 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 PTPRJQ12913 1337 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 CCL16O15467 120 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 TACR2P21452 398 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 STOMP27105 288 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 CENPAP49450 140 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 ABHD18Q0P651 414 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 GRB7Q14451 532 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 SPCS2Q15005 226 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 TECRLQ5HYJ1 363 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 ADGRG5Q8IZF4 528 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 RBFAQ8N0V3 343 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 RHOXF1Q8NHV9 184 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 MZB1Q8WU39 189 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 KLHL6Q8WZ60 621 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 OR8D1Q8WZ84 308 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 AHCYL2Q96HN2 611 aaKnown RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 BBS4Q96RK4 519 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 KCNA7Q96RP8 456 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 BRD9Q9H8M2 597 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 WDR6Q9NNW5 1121 aaKnown RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 MAP10Q9P2G4 905 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 SLC2A6Q9UGQ3 507 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 NHSL1Q5SYE7 1610 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 LAMA4Q16363 1823 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 E9PAM4 449 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 PPEF2O14830 753 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 DFNA5O60443 496 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 ECI2O75521 394 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 GADD45GO95257 159 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 RPL17P18621 184 aaKnown RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 OR4D2P58180 307 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 SRSF11Q05519 484 aaKnown RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 GRIK2Q13002 908 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 LAPTM4AQ15012 233 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 PAQR3Q6TCH7 311 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 VN1R5Q7Z5H4 357 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 NOXA1Q86UR1 476 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 MKRN2Q9H000 416 aaKnown RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 RNF39Q9H2S5 420 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 SMURF1Q9HCE7 757 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 THUMPD1Q9NXG2 353 aaKnown RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 GTF2IRD1Q9UHL9 959 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 ABHD14A-ACY1A0A1B0GW23 586 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 MID1O15344 667 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 KDM4BO94953 1096 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 G6PDP11413 515 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 CSTF2P33240 577 aaKnown RBP eCLIP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 ASMTP46597 345 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 LRP8Q14114 963 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 KLHL22Q53GT1 634 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 SNX29P2Q8IUI4 249 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 LGI4Q8N135 537 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 C2CD4AQ8NCU7 369 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 OR8J3Q8NGG0 315 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 WDR48Q8TAF3 677 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 NPLOC4Q8TAT6 608 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 BPIFB1Q8TDL5 484 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 DEDD2Q8WXF8 326 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 TBC1D17Q9HA65 648 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 CACNG4Q9UBN1 327 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 SEC14L4Q9UDX3 406 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 MAB21L2Q9Y586 359 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 SNX10Q9Y5X0 201 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms