RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 FARSAQ9Y285 508 aaKnown RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 COQ4Q9Y3A0 265 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 DOCK4Q8N1I0 1966 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 MYO7BQ6PIF6 2116 aa3.59□□□□□ -1.84
PDLIM5-218ENST00000513341 COL6A5A8TX70 2615 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 MDC1Q14676 2089 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 IGLV3-10A0A075B6K4 115 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ARGFXA6NJG6 315 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 OR5K4A6NMS3 321 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 A8MU76 341 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 H3BML4 177 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 KCNN4O15554 427 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 THAP12O43422 761 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 SPAG6O75602 509 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 KIAA0754O94854 1291 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 TMEM63AO94886 807 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 CD160O95971 181 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 F9P00740 461 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 C9P02748 559 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ALPPP05187 535 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 UGT2B4P06133 528 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 MTHFD1P11586 935 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 TEAD1P28347 426 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 HTR1EP28566 365 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 GJB2P29033 226 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 MPGP29372 298 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 GNALP38405 381 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 GPD2P43304 727 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 RGS7P49802 495 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 MAZP56270 477 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 SNX16P57768 344 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 POLR2LP62875 67 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ARF5P84085 180 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 PDE1BQ01064 536 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 GNA12Q03113 381 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 CDK18Q07002 472 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 CUL2Q13617 745 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 IL10RAQ13651 578 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC39A14Q15043 492 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ASIC2Q16515 512 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ALFQ53S48 1182 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 BRMS1LQ5PSV4 323 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 VWA5B1Q5TIE3 1220 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 IZUMO3Q5VZ72 239 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ERAP2Q6P179 960 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 PNCKQ6P2M8 343 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 BRAT1Q6PJG6 821 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 TMEM135Q86UB9 458 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 SKAP1Q86WV1 359 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 PPP1R3BQ86XI6 285 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 TGIF2LYQ8IUE0 185 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 RASGRP3Q8IV61 690 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 WDR75Q8IWA0 830 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 GUF1Q8N442 669 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 SFRP1Q8N474 314 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 RYBPQ8N488 228 aaPredicted RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ZADH2Q8N4Q0 377 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 AOPEPQ8N6M6 819 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ZBTB8BQ8NAP8 495 aaPredicted RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 FDCSPQ8NFU4 85 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 CCL4L1Q8NHW4 92 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 CLEC4CQ8WTT0 213 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 FAR1Q8WVX9 515 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 NCSTNQ92542 709 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ARHGEF2Q92974 986 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 MTFMTQ96DP5 389 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 TMX3Q96JJ7 454 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 CLPTM1LQ96KA5 538 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 PBKQ96KB5 322 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 MRGPRX4Q96LA9 322 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ZNF641Q96N77 438 aaPredicted RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 WRAP53Q9BUR4 548 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 NUDT9Q9BW91 350 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 TTYH3Q9C0H2 523 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 MIS12Q9H081 205 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ILKAPQ9H0C8 392 aaPredicted RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 BRD8Q9H0E9 1235 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 SIK2Q9H0K1 926 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 C11orf54Q9H0W9 315 aaPredicted RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ACTL8Q9H568 366 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 STN1Q9H668 368 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 WDCPQ9H6R7 721 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 FGF22Q9HCT0 170 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 PDE7BQ9NP56 450 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 SARS2Q9NP81 518 aaKnown RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 TMEM9Q9P0T7 183 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 RCOR3Q9P2K3 495 aaPredicted RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 HPCAL4Q9UM19 191 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ITM2BQ9Y287 266 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 OR1A2Q9Y585 309 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 PCDHA13Q9Y5I0 950 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 ZNF469Q96JG9 3925 aaPredicted RBP3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 RTTNQ86VV8 2226 aa3.58□□□□□ -1.84
PDLIM5-218ENST00000513341 TSPAN11A1L157 253 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 FAM90A10PA6NDY2 464 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 SOCS2O14508 198 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 PMM2O15305 246 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 KDELR3O43731 214 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 HSF2BPO75031 334 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms