RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 DYNLT1P63172 113 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 FOLH1Q04609 750 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 OCA2Q04671 838 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 ZNF33BQ06732 778 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 TUBA3CQ13748 450 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 GRB7Q14451 532 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 TAF1AQ15573 450 aaPredicted RBP10.62□□□□□ -0.71
RNF4-218ENST00000513284 FAM214AQ32MH5 1076 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 TCTE1Q5JU00 501 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 FCRLBQ6BAA4 426 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 SPINK14Q6IE38 97 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 H3F3CQ6NXT2 135 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 TUBA3EQ6PEY2 450 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 CNSTQ6PJW8 725 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 TMEM205Q6UW68 189 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 CEP128Q6ZU80 1094 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 ZNF567Q8N184 647 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 IPMKQ8NFU5 416 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 OR5K2Q8NHB8 316 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 P3H4Q92791 437 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 HDAC10Q969S8 669 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
RNF4-218ENST00000513284 LRRC45Q96CN5 670 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 FSD1LQ9BXM9 530 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 KLHL1Q9NR64 748 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 ZDHHC3Q9NYG2 299 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 KCNN3Q9UGI6 736 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 POLG2Q9UHN1 485 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 CRLS1Q9UJA2 301 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 INTUQ9ULD6 942 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 PRSS21Q9Y6M0 314 aa10.62□□□□□ -0.71
RNF4-218ENST00000513284 COL6A5A8TX70 2615 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 CSPG4Q6UVK1 2322 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 SLC5A10A0PJK1 596 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 A8MUI8 341 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 FOXO6A8MYZ6 492 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 TTI1O43156 1089 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 PSTPIP1O43586 416 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 SRPX2O60687 465 aaPredicted RBP10.61□□□□□ -0.71
RNF4-218ENST00000513284 CTAG2O75638 210 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 AP2A1O95782 977 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 MYBL2P10244 700 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 TNNT1P13805 278 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 ABOP16442 354 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 PKLRP30613 574 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 MPP3Q13368 585 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 BRD3Q15059 726 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 ASTE1Q2TB18 679 aaPredicted RBP10.61□□□□□ -0.71
RNF4-218ENST00000513284 ZC3H12BQ5HYM0 836 aaKnown RBP10.61□□□□□ -0.71
RNF4-218ENST00000513284 CES4AQ5XG92 561 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 RANBP10Q6VN20 620 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 PID1Q7Z2X4 250 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 SNX20Q7Z614 316 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.61□□□□□ -0.71
RNF4-218ENST00000513284 BIVMQ86UB2 503 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 SERPINA9Q86WD7 417 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 BEST3Q8N1M1 668 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 HEXDCQ8WVB3 486 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 ULK4Q96C45 1275 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 C10orf90Q96M02 699 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 IL17FQ96PD4 163 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 DNAJC7Q99615 494 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 SELENOSQ9BQE4 189 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 SYNPO2LQ9H987 977 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 LUC7LQ9NQ29 371 aaKnown RBP10.61□□□□□ -0.71
RNF4-218ENST00000513284 ABHD10Q9NUJ1 306 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 ANKRD10Q9NXR5 420 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 DNAJB12Q9NXW2 375 aaKnown RBP10.61□□□□□ -0.71
RNF4-218ENST00000513284 COQ3Q9NZJ6 369 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 ZC3H7BQ9UGR2 993 aaKnown RBP10.61□□□□□ -0.71
RNF4-218ENST00000513284 CIDEBQ9UHD4 219 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 RNF6Q9Y252 685 aa10.61□□□□□ -0.71
RNF4-218ENST00000513284 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.61□□□□□ -0.71
RNF4-218ENST00000513284 SCN2AQ99250 2005 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 C5orf60A6NFR6 353 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 C2orf81A6NN90 581 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 HACD1B0YJ81 288 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 CST8O60676 142 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 CXCR2P25025 360 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 ADRA1AP35348 466 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 DLX5P56178 289 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 YBX1P67809 324 aaKnown RBP10.6□□□□□ -0.71
RNF4-218ENST00000513284 ACER2Q5QJU3 275 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 KAZNQ674X7 775 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 PRMT9Q6P2P2 845 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 FBXO42Q6P3S6 717 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 CCDC71Q8IV32 467 aaPredicted RBP10.6□□□□□ -0.71
RNF4-218ENST00000513284 CNGA4Q8IV77 575 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 PIANPQ8IYJ0 282 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 RPRMLQ8N4K4 120 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 AMER3Q8N944 861 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 TTC29Q8NA56 475 aaPredicted RBP10.6□□□□□ -0.71
RNF4-218ENST00000513284 WFDC11Q8NEX6 87 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 SPATA3Q8NHX4 192 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 FICDQ9BVA6 458 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 REPIN1Q9BWE0 567 aaKnown RBP10.6□□□□□ -0.71
RNF4-218ENST00000513284 NHEJ1Q9H9Q4 299 aaPredicted RBP10.6□□□□□ -0.71
RNF4-218ENST00000513284 RIC8BQ9NVN3 520 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 TRHDEQ9UKU6 1024 aa10.6□□□□□ -0.71
RNF4-218ENST00000513284 PLEKHA6Q9Y2H5 1048 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms