RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 P2RX2Q9UBL9 471 aa8.19□□□□□ -1.1
HTT-208ENST00000510626 MGAT4BQ9UQ53 548 aa8.19□□□□□ -1.1
HTT-208ENST00000510626 DIDO1Q9BTC0 2240 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 CILPO75339 1184 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 C6orf183Q5T699 404 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 C3orf67Q6ZVT6 689 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ARMC10Q8N2F6 343 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ANGPTL6Q8NI99 470 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 MOAP1Q96BY2 351 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 BHLHE41Q9C0J9 482 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 CAPN10Q9HC96 672 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 TAS2R3Q9NYW6 316 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 C1orf196B1AJZ1 125 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 MAGEA6P43360 314 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 CPSF6Q16630 551 aaKnown RBP eCLIP8.18□□□□□ -1.1
HTT-208ENST00000510626 NKIRAS2Q9NYR9 191 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 MN1Q10571 1320 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 FXYD6-FXYD2A0A087WZ82 144 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 AURKAO14965 403 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 HTRA2O43464 458 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 ERCC1P07992 297 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 NSG1P42857 185 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ACTA2P62736 377 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ACTG2P63267 376 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 EN1Q05925 392 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 CDCA2Q69YH5 1023 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 TCEAL6Q6IPX3 200 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 SLC36A4Q6YBV0 504 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 HSDL2Q6YN16 418 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 PIGZQ86VD9 579 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 AMIGO1Q86WK6 493 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 RAVER1Q8IY67 606 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 C2orf15Q8WU43 125 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 FXYD6Q9H0Q3 95 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 NLGN3Q9NZ94 848 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 COMMD3Q9UBI1 195 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 USP12O75317 370 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 CHRNA1P02708 482 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 FMO3P31513 532 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 GRM5P41594 1212 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 TAS2R31P59538 309 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 RASGEF1AQ8N9B8 481 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 SETD7Q8WTS6 366 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 FEM1AQ9BSK4 669 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 NELFAQ9H3P2 528 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 C11orf16Q9NQ32 467 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 H0YGN5 161 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 CLDN4O14493 209 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 IFNA1P01562 189 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 HSD3B1P14060 373 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 HSD3B2P26439 372 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 PHYKPLQ8IUZ5 450 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 MEAF6Q9HAF1 191 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 TMEM39AQ9NV64 488 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 PCDHB3Q9Y5E6 796 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 NFS1Q9Y697 457 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 L7N2F9 121 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 PTBP1P26599 531 aaKnown RBP eCLIP8.18□□□□□ -1.14e-7■■□□□ 13.9
HTT-208ENST00000510626 SSTP61278 116 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 VAMP2P63027 116 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ZNF304Q9HCX3 659 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 BRD7Q9NPI1 651 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 C3P01024 1663 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 GADD45GO95257 159 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 DDX6P26196 483 aaKnown RBP eCLIP8.18□□□□□ -1.1
HTT-208ENST00000510626 GRK5P34947 590 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 HLCSP50747 726 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ZNF267Q14586 743 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 CLCA4Q14CN2 919 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 C9orf64Q5T6V5 341 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 TMCO2Q7Z6W1 182 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 OR10T2Q8NGX3 314 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 GIMAP5Q96F15 307 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 CBY1Q9Y3M2 126 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 UNGP13051 313 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 ATP5A1P25705 553 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 CRADDP78560 199 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 CARTPTQ16568 116 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 GPR156Q8NFN8 814 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 KCTD12Q96CX2 325 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 NIFKQ9BYG3 293 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 POTEKPQ9BYX7 375 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ZNF436Q9C0F3 470 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 TAS2R10Q9NYW0 307 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 KLK14Q9P0G3 267 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ADGRB1O14514 1584 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 HK1P19367 917 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 RPL10P27635 214 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 ORC1Q13415 861 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 TMEM214Q6NUQ4 689 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 LIX1Q8N485 282 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ZNF283Q8N7M2 679 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 CXorf40AQ8TE69 158 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ARL11Q969Q4 196 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 HSPBAP1Q96EW2 488 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 AHCYL2Q96HN2 611 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 UGT2A1Q9Y4X1 527 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 AGAP5A6NIR3 686 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 SCARB2Q14108 478 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 OGFRL1Q5TC84 451 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms