RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 IL11P20809 199 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 PCSK6P29122 969 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 FMO4P31512 558 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 SLC8A1P32418 973 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 GPD2P43304 727 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 FMO5P49326 533 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 NDST1P52848 882 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 ATXN3P54252 364 aaPredicted RBP4.88□□□□□ -1.63
NEK1-204ENST00000509912 IRX4P78413 519 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 HNRNPA1L2Q32P51 320 aaKnown RBP4.88□□□□□ -1.63
NEK1-204ENST00000509912 MS4A13Q5J8X5 152 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 C6orf163Q5TEZ5 329 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 SFMBT2Q5VUG0 894 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 INO80CQ6PI98 192 aaPredicted RBP4.88□□□□□ -1.63
NEK1-204ENST00000509912 RAB40AQ8WXH6 277 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 ASB10Q8WXI3 467 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 ZNF347Q96SE7 839 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 CYP2S1Q96SQ9 504 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 CD180Q99467 661 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 FRMD8Q9BZ67 464 aaPredicted RBP4.88□□□□□ -1.63
NEK1-204ENST00000509912 ELOVL2Q9NXB9 296 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 TAB2Q9NYJ8 693 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 MRPL15Q9P015 296 aaKnown RBP4.88□□□□□ -1.63
NEK1-204ENST00000509912 SH3BP4Q9P0V3 963 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 RALYQ9UKM9 306 aaKnown RBP4.88□□□□□ -1.63
NEK1-204ENST00000509912 GTF3C4Q9UKN8 822 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 CLCA2Q9UQC9 943 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 SNX5Q9Y5X3 404 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 DCHS1Q96JQ0 3298 aa4.88□□□□□ -1.63
NEK1-204ENST00000509912 MYH10P35580 1976 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 SDK1Q7Z5N4 2213 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 MYO15AQ9UKN7 3530 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 ZNF202O95125 648 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 ELFN1P0C7U0 828 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 COMTP21964 271 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 CPT2P23786 658 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 RPS19P39019 145 aaKnown RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 NDUFA8P51970 172 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 RPS14P62263 151 aaKnown RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 OLR1P78380 273 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 IRX1P78414 480 aaPredicted RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 KDSRQ06136 332 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 C17orf67Q0P5P2 114 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 ABHD18Q0P651 414 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 TRA2AQ13595 282 aaKnown RBP eCLIP4.87□□□□□ -1.63
NEK1-204ENST00000509912 IGSF11Q5DX21 431 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 RABL3Q5HYI8 236 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 MDH1BQ5I0G3 518 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 RABGAP1LQ5R372 815 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 SUSD1Q6UWL2 747 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 ABI3BPQ7Z7G0 1075 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 DHX40Q8IX18 779 aaKnown RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 FAM71AQ8IYT1 594 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 CCDC170Q8IYT3 715 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 ALLCQ8N6M5 410 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 PCDH20Q8N6Y1 951 aaKnown RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 SAAL1Q96ER3 474 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 CCDC114Q96M63 670 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 IQCGQ9H095 443 aaKnown RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 LINC00597Q9H2U6 94 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 ABCB8Q9NUT2 735 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 SEMA5BQ9P283 1151 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 NCKAP1Q9Y2A7 1128 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 LYVE1Q9Y5Y7 322 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 MYOFQ9NZM1 2061 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 PI4KAP42356 2102 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 TCRBV21S2A2A0A5A6 115 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 NPEPPSL1A6NEC2 478 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 QSOX1O00391 747 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 TP73O15350 636 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 KIF5CO60282 957 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 CNTN5O94779 1100 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 TOP3BO95985 862 aaKnown RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 MBL2P11226 248 aaPredicted RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 GSTM2P28161 218 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 MXI1P50539 228 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 INHBCP55103 352 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 RPL26P61254 145 aaKnown RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 KRT83P78385 493 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 NFE2L1Q14494 772 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 BEAN1Q3B7T3 259 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 HHATQ5VTY9 493 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 SFRP4Q6FHJ7 346 aaPredicted RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 CDC73Q6P1J9 531 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 WDR93Q6P2C0 686 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 ANKRD16Q6P6B7 361 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 Q6ZWC4 215 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 ADIPOR2Q86V24 386 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 LUZP1Q86V48 1076 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 PHF13Q86YI8 300 aaPredicted RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 KLHDC8BQ8IXV7 354 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 LGI4Q8N135 537 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 POC5Q8NA72 575 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 AKAP1Q92667 903 aaKnown RBP eCLIP4.87□□□□□ -1.63
NEK1-204ENST00000509912 SLC22A18Q96BI1 424 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 MMABQ96EY8 250 aaPredicted RBP4.87□□□□□ -1.63
NEK1-204ENST00000509912 PDLIM2Q96JY6 352 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 FCRL4Q96PJ5 515 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 NPY6RQ99463 290 aa4.87□□□□□ -1.63
NEK1-204ENST00000509912 CHRNA10Q9GZZ6 450 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms