RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 HES6Q96HZ4 224 aa12.74□□□□□ -0.37
DDX41-210ENST00000509576 BIRC8Q96P09 236 aa12.74□□□□□ -0.37
DDX41-210ENST00000509576 PANX2Q96RD6 677 aa12.74□□□□□ -0.37
DDX41-210ENST00000509576 ANP32EQ9BTT0 268 aa12.74□□□□□ -0.37
DDX41-210ENST00000509576 MRM3Q9HC36 420 aaKnown RBP12.74□□□□□ -0.37
DDX41-210ENST00000509576 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.74□□□□□ -0.37
DDX41-210ENST00000509576 ZC3H7BQ9UGR2 993 aaKnown RBP12.74□□□□□ -0.37
DDX41-210ENST00000509576 C3orf18Q9UK00 162 aa12.74□□□□□ -0.37
DDX41-210ENST00000509576 MRPS2Q9Y399 296 aaKnown RBP12.74□□□□□ -0.37
DDX41-210ENST00000509576 MED13LQ71F56 2210 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 H0YGG7 62 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 PRMT5O14744 637 aaPredicted RBP12.73□□□□□ -0.37
DDX41-210ENST00000509576 P2RX6O15547 441 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 FOXS1O43638 330 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 NIPSNAP2O75323 286 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 JRKO75564 520 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 ADRA1DP25100 572 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 ST13P50502 369 aaKnown RBP12.73□□□□□ -0.37
DDX41-210ENST00000509576 TNFSF10P50591 281 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 ARF3P61204 181 aaPredicted RBP12.73□□□□□ -0.37
DDX41-210ENST00000509576 EEF1A2Q05639 463 aaKnown RBP12.73□□□□□ -0.37
DDX41-210ENST00000509576 PCOLCEQ15113 449 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 TLR1Q15399 786 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 HKDC1Q2TB90 917 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 ZC3H12BQ5HYM0 836 aaKnown RBP12.73□□□□□ -0.37
DDX41-210ENST00000509576 TCTE1Q5JU00 501 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 YOD1Q5VVQ6 348 aaPredicted RBP12.73□□□□□ -0.37
DDX41-210ENST00000509576 RPUSD3Q6P087 351 aaKnown RBP12.73□□□□□ -0.37
DDX41-210ENST00000509576 CNSTQ6PJW8 725 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 CES3Q6UWW8 571 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 NLRP9Q7RTR0 991 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 PEX26Q7Z412 305 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 LINC00523Q86TU6 105 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 DNAAF3Q8N9W5 541 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 C1orf54Q8WWF1 131 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 RELTQ969Z4 430 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 FAM136AQ96C01 138 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 LMF1Q96S06 567 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 SLC30A3Q99726 388 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 DESI2Q9BSY9 194 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 ACAT2Q9BWD1 397 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 TRIM5Q9C035 493 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 ZNF304Q9HCX3 659 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 IGSF5Q9NSI5 407 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 PTGFRNQ9P2B2 879 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 AMFRQ9UKV5 643 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 TTC7AQ9ULT0 858 aaPredicted RBP12.73□□□□□ -0.37
DDX41-210ENST00000509576 CCDC168Q8NDH2 2452 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 ZFHX3Q15911 3703 aa12.73□□□□□ -0.37
DDX41-210ENST00000509576 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 IGHV1-45A0A0A0MS14 117 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 ARHGEF33A8MVX0 844 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 TARM1B6A8C7 271 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 GOLGA8KD6RF30 607 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 GOLGA8TH3BQL2 631 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 PSMD3O43242 534 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 MATN4O95460 622 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 APOA4P06727 396 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 ITGAMP11215 1152 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 ACPPP15309 386 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 ZNF75DP51815 510 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
DDX41-210ENST00000509576 PMP22Q01453 160 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 FASTKD1Q53R41 847 aaKnown RBP12.72□□□□□ -0.37
DDX41-210ENST00000509576 FAAH2Q6GMR7 532 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 SUSD1Q6UWL2 747 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 ZC3H7AQ8IWR0 971 aaKnown RBP12.72□□□□□ -0.37
DDX41-210ENST00000509576 MCEMP1Q8IX19 187 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 TTC29Q8NA56 475 aaPredicted RBP12.72□□□□□ -0.37
DDX41-210ENST00000509576 NR4A3Q92570 626 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 ZUFSPQ96AP4 578 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 EPS8L2Q9H6S3 715 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 RAB6BQ9NRW1 208 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 CATSPERZQ9NTU4 200 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 OLAHQ9NV23 265 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 NXT1Q9UKK6 140 aaKnown RBP12.72□□□□□ -0.37
DDX41-210ENST00000509576 SLC39A10Q9ULF5 831 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 RUVBL1Q9Y265 456 aaKnown RBP12.72□□□□□ -0.37
DDX41-210ENST00000509576 MED16Q9Y2X0 877 aa12.72□□□□□ -0.37
DDX41-210ENST00000509576 TCRBV7S3A2A0A539 114 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 OR2W5A6NFC9 320 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 ERI2A8K979 691 aaKnown RBP12.71□□□□□ -0.37
DDX41-210ENST00000509576 IDSB3KWA1 339 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 PRSS44E7EML9 344 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 CD3EAPO15446 510 aaKnown RBP12.71□□□□□ -0.37
DDX41-210ENST00000509576 HNRNPRO43390 633 aaKnown RBP12.71□□□□□ -0.37
DDX41-210ENST00000509576 KLHL41O60662 606 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 SRPX2O60687 465 aaPredicted RBP12.71□□□□□ -0.37
DDX41-210ENST00000509576 IFNB1P01574 187 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 STATHP02808 62 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 EIF2S1P05198 315 aaKnown RBP12.71□□□□□ -0.37
DDX41-210ENST00000509576 RPS3P23396 243 aaKnown RBP eCLIP12.71□□□□□ -0.377e-10■■■■□ 20.3
DDX41-210ENST00000509576 RPL22P35268 128 aaKnown RBP12.71□□□□□ -0.37
DDX41-210ENST00000509576 MAT1AQ00266 395 aaKnown RBP12.71□□□□□ -0.37
DDX41-210ENST00000509576 SNX1Q13596 522 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 ACSBG2Q5FVE4 666 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 ZNF425Q6IV72 752 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 PPP1R21Q6ZMI0 780 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 PRSS41Q7RTY9 318 aa12.71□□□□□ -0.37
DDX41-210ENST00000509576 PAQR7Q86WK9 346 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms