RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 LINC01555Q8NAE3 123 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 KYQ8NBH2 561 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 OR4F6Q8NGB9 312 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 OR4E2Q8NGC2 313 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 SLC5A11Q8WWX8 675 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 UBE2E3Q969T4 207 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 PTCD3Q96EY7 689 aaKnown RBP10.03□□□□□ -0.8
RFC1-211ENST00000509084 SLC38A3Q99624 504 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 EFCAB11Q9BUY7 163 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 PITHD1Q9GZP4 211 aaPredicted RBP10.03□□□□□ -0.8
RFC1-211ENST00000509084 TWSG1Q9GZX9 223 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 FAM107BQ9H098 131 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 PELI2Q9HAT8 420 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 KLHL14Q9P2G3 628 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 TAC3Q9UHF0 121 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 TRAF6Q9Y4K3 522 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 ZNF318Q5VUA4 2279 aa10.03□□□□□ -0.8
RFC1-211ENST00000509084 ISM1B1AKI9 464 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 E7EQ34 232 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 NDUFAB1O14561 156 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 UBFD1O14562 309 aaKnown RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 OR4F21O95013 312 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 KRT6AP02538 564 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 KRT6BP04259 564 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 GIMD1P0DJR0 217 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 JUPP14923 745 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 ALOX15P16050 662 aaPredicted RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 PNLIPP16233 465 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 NPPBP16860 134 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 TSPAN8P19075 237 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 EPORP19235 508 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 CXCR2P25025 360 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 ARRB2P32121 409 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 NBL1P41271 181 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 GRK6P43250 576 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 CCR10P46092 362 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 KRT6CP48668 564 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 DUSP3P51452 185 aaPredicted RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 GABPB1Q06547 395 aaPredicted RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 PRDX1Q06830 199 aaKnown RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 CHIT1Q13231 466 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 NR1D2Q14995 579 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 XKR6Q5GH73 641 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 GKAP1Q5VSY0 366 aaPredicted RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 KANK2Q63ZY3 851 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 ICE2Q659A1 982 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 ATG9BQ674R7 924 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 GRHL2Q6ISB3 625 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 LETMD1Q6P1Q0 360 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 RNF165Q6ZSG1 346 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 ZNF438Q7Z4V0 828 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 SPATA21Q7Z572 469 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 SLC35F3Q8IY50 421 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 ADGRF3Q8IZF5 1079 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 KRT78Q8N1N4 520 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 TBC1D19Q8N5T2 526 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 SUMF1Q8NBK3 374 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 OR52B6Q8NGF0 335 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 OR2A1Q8NGT9 310 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 BCAS4Q8TDM0 211 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 CCT6BQ92526 530 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 ATOH1Q92858 354 aaPredicted RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 NAT6Q93015 286 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 NEIL2Q969S2 332 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 KCTD12Q96CX2 325 aaKnown RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 REPS1Q96D71 796 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 MOCOSQ96EN8 888 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 WDR34Q96EX3 536 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 OR4K3Q96R72 315 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 CCT8L2Q96SF2 557 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 XKR8Q9H6D3 395 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 CAAP1Q9H8G2 361 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 ZNF395Q9H8N7 513 aaPredicted RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 IL21RQ9HBE5 538 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 FSCN3Q9NQT6 498 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 ACSS2Q9NR19 701 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 ABCF3Q9NUQ8 709 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 DNAAF2Q9NVR5 837 aaKnown RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 ANKMY1Q9P2S6 941 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 NCDNQ9UBB6 729 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 MARCOQ9UEW3 520 aaPredicted RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 ZDHHC2Q9UIJ5 367 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 SNX6Q9UNH7 406 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 APOBEC2Q9Y235 224 aaKnown RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 USH1CQ9Y6N9 552 aa10.02□□□□□ -0.81
RFC1-211ENST00000509084 TDRD6O60522 2096 aaKnown RBP10.02□□□□□ -0.81
RFC1-211ENST00000509084 PRAMEF33A0A0G2JMD5 474 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 A0A1W2PPV9 198 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 GSAPA4D1B5 854 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 OR6C74A6NCV1 312 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 OR5K3A6NET4 321 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 BTN3A3O00478 584 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 FLRT2O43155 660 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 PRICKLE3O43900 615 aaPredicted RBP10.01□□□□□ -0.81
RFC1-211ENST00000509084 SNX3O60493 162 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 UBXN7O94888 489 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 LMNAP02545 664 aaKnown RBP10.01□□□□□ -0.81
RFC1-211ENST00000509084 PROS1P07225 676 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 CAPN1P07384 714 aa10.01□□□□□ -0.81
RFC1-211ENST00000509084 C1GALT1C1LP0DN25 315 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms