RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 LETMD1Q6P1Q0 360 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 TBPL2Q6SJ96 375 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 SCIMPQ6UWF3 145 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 SERPINA13PQ6UXR4 307 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 MBOAT1Q6ZNC8 495 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 RALGPS2Q86X27 583 aaPredicted RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 OR4F6Q8NGB9 312 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 GIPC3Q8TF64 312 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 PPM1MQ96MI6 270 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 GUCD1Q96NT3 240 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 CDX2Q99626 313 aaPredicted RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 FAM83CQ9BQN1 747 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 FAM126AQ9BYI3 521 aaPredicted RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 IPPKQ9H8X2 491 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 DEC1Q9P2X7 70 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 C3orf18Q9UK00 162 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 TCF20Q9UGU0 1960 aaKnown RBP10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 A0A1W2PPW3 197 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 TSPAN11A1L157 253 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 ELOVL7A1L3X0 281 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 FADS2P1A8MWK0 482 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 H0Y858 1186 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 OR7A17O14581 309 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 GNGT2O14610 69 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 CYP2A6P11509 494 aaPredicted RBP10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 XPAP23025 273 aaPredicted RBP10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 MMP12P39900 470 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 ARL1P40616 181 aaPredicted RBP10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 GDF5P43026 501 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 GNPDA1P46926 289 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 HSPA7P48741 367 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 HNRNPFP52597 415 aaKnown RBP10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 TPD52P55327 224 aaPredicted RBP10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 CYP4F3Q08477 520 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 HSPA14Q0VDF9 509 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 FNDC3BQ53EP0 1204 aaKnown RBP10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 CDKL4Q5MAI5 379 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 ZDHHC20Q5W0Z9 365 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 TMEM214Q6NUQ4 689 aaKnown RBP10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 OR5K1Q8NHB7 308 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 WFIKKN2Q8TEU8 576 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 PLEKHA8Q96JA3 519 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 CCDC138Q96M89 665 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 HBEGFQ99075 208 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 WRAP53Q9BUR4 548 aaKnown RBP10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 RIOK2Q9BVS4 552 aaKnown RBP10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 TRIM8Q9BZR9 551 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 DPY30Q9C005 99 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 FAM83DQ9H4H8 585 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 ACTL8Q9H568 366 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 FANCEQ9HB96 536 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 FAM118AQ9NWS6 357 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 TRPS1Q9UHF7 1281 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 ADGRE2Q9UHX3 823 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 SH3GLB1Q9Y371 365 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 OARD1Q9Y530 152 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 ANGPTL3Q9Y5C1 460 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 ORC6Q9Y5N6 252 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 SNX5Q9Y5X3 404 aa10.71□□□□□ -0.69
SH3RF1-203ENST00000508685 KRT87PA6NCN2 255 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 PLK4O00444 970 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 TAPBPO15533 448 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 ERN1O75460 977 aaKnown RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 RECQL5O94762 991 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 PAPLNO95428 1278 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 CST1P01037 141 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 ELFN1P0C7U0 828 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 EBLN1P0CF75 366 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 ATP1B2P14415 290 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 SLC2A4P14672 509 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 RYKP34925 604 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 RAD23AP54725 363 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 MTPNP58546 118 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 SFSWAPQ12872 951 aaKnown RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 BOP1Q14137 746 aaKnown RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 FGD3Q5JSP0 725 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 C6orf141Q5SZD1 244 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 HENMT1Q5T8I9 393 aaKnown RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 C16orf87Q6PH81 154 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 VITQ6UXI7 678 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 TRIM46Q7Z4K8 759 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 HIPK1Q86Z02 1210 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 VRK3Q8IV63 474 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 EID3Q8N140 333 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 BEND7Q8N7W2 519 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 UBTD2Q8WUN7 234 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 TBC1D20Q96BZ9 403 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 SLC47A1Q96FL8 570 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 EGFL8Q99944 293 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 THUMPD3Q9BV44 507 aaKnown RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 NTMT1Q9BV86 223 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 SLC29A3Q9BZD2 475 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 FAM8A1Q9UBU6 413 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 PDE10AQ9Y233 779 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 HEMK1Q9Y5R4 338 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 MUC22E2RYF6 1773 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 OR2AG2A6NM03 316 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 FAM220BPB1ANY3 271 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 SPINT1O43278 529 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 MRPS14O60783 128 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms