RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 NWD2Q9ULI1 1742 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 PARD3Q8TEW0 1356 aa4.48□□□□□ -1.69
TOPBP1-206ENST00000508524 PCDH11YQ9BZA8 1340 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 FSD2A1L4K1 749 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 ANKRD61A6NGH8 418 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 ZNF195O14628 629 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 TNRC18O15417 2968 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 TOMM70O94826 608 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 HSPA8P11142 646 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 HOXC13P31276 330 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 GSDMDP57764 484 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 HERV-K104P61576 105 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 DRP2Q13474 957 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 GRAPQ13588 217 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 ENPP2Q13822 863 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 PCLAFQ15004 111 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 BSPRYQ5W0U4 402 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 FAM205BPQ63HN1 556 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 C4orf50Q6ZRC1 276 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 Q6ZRP5 223 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 RPAP2Q8IXW5 612 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 C17orf53Q8N3J3 647 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 OR11H4Q8NGC9 324 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 NSMCE3Q96MG7 304 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 SHARPINQ9H0F6 387 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 CPVLQ9H3G5 476 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 SERINC1Q9NRX5 453 aa4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 COL5A2P05997 1499 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-206ENST00000508524 NPHP3Q7Z494 1330 aa4.46□□□□□ -1.69
TOPBP1-206ENST00000508524 ABCC5O15440 1437 aa4.46□□□□□ -1.69
TOPBP1-206ENST00000508524 ATP10DQ9P241 1426 aa4.46□□□□□ -1.69
TOPBP1-206ENST00000508524 DLC1Q96QB1 1528 aa4.46□□□□□ -1.69
TOPBP1-206ENST00000508524 RPRD2Q5VT52 1461 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 GPR75-ASB3A0A0A6YYF3 556 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 MEX3AA1L020 520 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 PI15O43692 258 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 GATA1P15976 413 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 GJA1P17302 382 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 LEPRP48357 1165 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 MAZP56270 477 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 PSMC6P62333 389 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 SQLEQ14534 574 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 HLA-BQ31612 363 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 FASTKD1Q53R41 847 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 IGSF11Q5DX21 431 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 ELFN2Q5R3F8 820 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 SPINK14Q6IE38 97 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 FIP1L1Q6UN15 594 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 PTAR1Q7Z6K3 402 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 RTN4RL2Q86UN3 420 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 TMEM173Q86WV6 379 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 HOGA1Q86XE5 327 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 EID3Q8N140 333 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 GUF1Q8N442 669 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 NIPA2Q8N8Q9 360 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 CCDC107Q8WV48 283 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 DHX58Q96C10 678 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 MS4A10Q96PG2 267 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 KRT12Q99456 494 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 RAD9AQ99638 391 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 BARD1Q99728 777 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 OR2B2Q9GZK3 357 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 HAUS2Q9NVX0 235 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 P4HTMQ9NXG6 502 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 SPHK1Q9NYA1 384 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 TBC1D29Q9UFV1 150 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 ANGPTL3Q9Y5C1 460 aa4.46□□□□□ -1.7
TOPBP1-206ENST00000508524 KANK1Q14678 1352 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 TSPAN1O60635 241 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 BCL10O95999 233 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 ZSCAN5DPP0CG00 497 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 TRIM49P0CI25 452 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 TRIM49CP0CI26 452 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 CSH1P0DML2 217 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 CSH2P0DML3 217 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 SLC9A3P48764 834 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 GEMIN4P57678 1058 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 ZNF415Q09FC8 603 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 RNASEH2BQ5TBB1 312 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 C20orf194Q5TEA3 1177 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 TMEM211Q6ICI0 200 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 LINC00346Q8IVM7 164 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 OR10G8Q8NGN5 311 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 LPGAT1Q92604 370 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 NSUN4Q96CB9 384 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 Q9N2K0 584 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 CROCC2H7BZ55 1655 aa4.45□□□□□ -1.7
TOPBP1-206ENST00000508524 CDC42BPGQ6DT37 1551 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 MYH15Q9Y2K3 1946 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 ADCY9O60503 1353 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 ENTPD3O75355 529 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 NXPH2O95156 264 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 OPRL1P41146 370 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 MAT1AQ00266 395 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 LMOD3Q0VAK6 560 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 TAF10Q12962 218 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 UGP2Q16851 508 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 GLIPR1L2Q4G1C9 344 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 BTN2A1Q7KYR7 527 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms