RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 PIM1P11309 404 aaPredicted RBP17.1■□□□□ 0.33
SKP2-204ENST00000508514 SNRPNP63162 240 aaKnown RBP17.1■□□□□ 0.33
SKP2-204ENST00000508514 PRTGQ2VWP7 1150 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 FAM214AQ32MH5 1076 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 TTC23LQ6PF05 361 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 CENPUQ71F23 418 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 LAPTM4BQ86VI4 370 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 STT3BQ8TCJ2 826 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 SLC30A3Q99726 388 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 WDR77Q9BQA1 342 aaPredicted RBP17.1■□□□□ 0.33
SKP2-204ENST00000508514 ACAT2Q9BWD1 397 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 IL1RAPL1Q9NZN1 696 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 SOX13Q9UN79 622 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 NOVA2Q9UNW9 492 aaKnown RBP17.1■□□□□ 0.33
SKP2-204ENST00000508514 MED16Q9Y2X0 877 aa17.1■□□□□ 0.33
SKP2-204ENST00000508514 KLHL41O60662 606 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 KLHL18O94889 574 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 TPSB2P20231 275 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 CCNFP41002 786 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 ADARP55265 1226 aaKnown RBP17.09■□□□□ 0.33
SKP2-204ENST00000508514 KLC1Q07866 573 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 TRIP13Q15645 432 aaPredicted RBP17.09■□□□□ 0.33
SKP2-204ENST00000508514 TPSAB1Q15661 275 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 VWA2Q5GFL6 755 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 ANKRD22Q5VYY1 191 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 ATG9BQ674R7 924 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 SUSD1Q6UWL2 747 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 C4orf22Q6V702 233 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 CAND1Q86VP6 1230 aaKnown RBP17.09■□□□□ 0.33
SKP2-204ENST00000508514 KCNMB4Q86W47 210 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 ARHGEF39Q8N4T4 335 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 PRELID2Q8N945 189 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 TTC29Q8NA56 475 aaPredicted RBP17.09■□□□□ 0.33
SKP2-204ENST00000508514 PPP4R1Q8TF05 950 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 TM9SF4Q92544 642 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 DPH7Q9BTV6 452 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 ZNF304Q9HCX3 659 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 LZTFL1Q9NQ48 299 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 SEMA3GQ9NS98 782 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 ZKSCAN5Q9Y2L8 839 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 POLEQ07864 2286 aa17.09■□□□□ 0.33
SKP2-204ENST00000508514 IGLV3-12A0A075B6K2 115 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 H0YGG7 62 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 MYO1CO00159 1063 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 E2F3O00716 465 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 PSIP1O75475 530 aaKnown RBP17.08■□□□□ 0.32
SKP2-204ENST00000508514 EIF2S1P05198 315 aaKnown RBP17.08■□□□□ 0.32
SKP2-204ENST00000508514 ZGLP1P0C6A0 271 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 ATP5DP30049 168 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 CXCR5P32302 372 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 TERF1P54274 439 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 ARF3P61204 181 aaPredicted RBP17.08■□□□□ 0.32
SKP2-204ENST00000508514 KCNJ11Q14654 390 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 TUBB8Q3ZCM7 444 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 AGAP7PQ5VUJ5 663 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 ZNF787Q6DD87 383 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 ZNF662Q6ZS27 426 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 GSTA5Q7RTV2 222 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 PRSS58Q8IYP2 241 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 CATSPER1Q8NEC5 780 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 OR9A1PQ8NGU1 263 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 GIMAP7Q8NHV1 300 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 GSDMBQ8TAX9 411 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 C8orf44Q96CB5 159 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 THOC3Q96J01 351 aaKnown RBP17.08■□□□□ 0.32
SKP2-204ENST00000508514 AGAP4Q96P64 663 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 PKP4Q99569 1192 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 LHPPQ9H008 270 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 SPATA7Q9P0W8 599 aa17.08■□□□□ 0.32
SKP2-204ENST00000508514 NXT1Q9UKK6 140 aaKnown RBP17.08■□□□□ 0.32
SKP2-204ENST00000508514 FFAR3O14843 346 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 GPR42O15529 346 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 ESR1P03372 595 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 MAGEA6P43360 314 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 CLCN7P51798 805 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 EFNA3P52797 238 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 CDK16Q00536 496 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 RBBP7Q16576 425 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 KLHL38Q2WGJ6 581 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 KIAA0930Q6ICG6 404 aaPredicted RBP17.07■□□□□ 0.32
SKP2-204ENST00000508514 MRNIPQ6NTE8 343 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 PRMT9Q6P2P2 845 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 TTC27Q6P3X3 843 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 ZNF549Q6P9A3 640 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 SDCCAG8Q86SQ7 713 aaPredicted RBP17.07■□□□□ 0.32
SKP2-204ENST00000508514 PAQR7Q86WK9 346 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 CILP2Q8IUL8 1156 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 SHISA5Q8N114 240 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 AGGF1Q8N302 714 aaeCLIP17.07■□□□□ 0.32
SKP2-204ENST00000508514 OTUD6BQ8N6M0 293 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 DNAJB14Q8TBM8 379 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 PSMF1Q92530 271 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 FOPNLQ96NB1 174 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 TCF12Q99081 682 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 ZFYVE21Q9BQ24 234 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 PLCD4Q9BRC7 762 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 CRB3Q9BUF7 120 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 SLC5A6Q9Y289 635 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 ITPR2Q14571 2701 aa17.07■□□□□ 0.32
SKP2-204ENST00000508514 CNTRLQ7Z7A1 2325 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms