RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 A0A075B6Q4 140 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 TRBV5-3A0A0A0MS03 114 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 EFCAB10A6NFE3 127 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CASTOR2A6NHX0 329 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 A8MVJ9 347 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 MYO1GB0I1T2 1018 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 EIF3FO00303 357 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 MANBAO00462 879 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR7A17O14581 309 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ENPP3O14638 875 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ADAMDEC1O15204 470 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 FFAR2O15552 330 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZW10O43264 779 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 TREHO43280 583 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 TBX1O43435 398 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 XPNPEP2O43895 674 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 NIPSNAP2O75323 286 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CCNKO75909 580 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 DKK1O94907 266 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 EPN2O95208 641 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CLDN9O95484 217 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF682O95780 498 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 C9P02748 559 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 FAM157BP0CG42 384 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CBSLP0DN79 551 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 EPB42P16452 691 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 NR4A1P22736 598 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 PRPH2P23942 346 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 PRDX3P30048 256 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 MC4RP32245 332 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CBSP35520 551 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 IRS1P35568 1242 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CASP3P42574 277 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 MAP2K4P45985 399 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 PXNP49023 591 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 GZMMP51124 257 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 RABGGTBP53611 331 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 IST1P53990 364 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CDH4P55283 916 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ITGA1P56199 1179 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 NCS1P62166 190 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 RPS14P62263 151 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 YBX1P67809 324 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 IFITM3Q01628 133 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 IL1RL1Q01638 556 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 PIGFQ07326 219 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 EFEMP1Q12805 493 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 SMARCB1Q12824 385 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 NPRL3Q12980 569 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 GTF2H3Q13889 308 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 VEZF1Q14119 521 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 DGCR6Q14129 220 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 SIM2Q14190 667 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ELOAQ14241 798 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 GALNT3Q14435 633 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 GRB14Q14449 540 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 STARD3Q14849 445 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ABRAXAS2Q15018 415 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 MAPK11Q15759 364 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 NKG7Q16617 165 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 TIGD6Q17RP2 521 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 DUOXA1Q1HG43 343 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 GGTA1PQ4G0N0 100 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 RFTN2Q52LD8 501 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 SETMARQ53H47 684 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARMCX4Q5H9R4 360 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 SPANXN4Q5MJ08 99 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CTSL3PQ5NE16 218 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARTNQ5T4W7 220 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 C1orf53Q5VUE5 145 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 AGAP6Q5VW22 663 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 RSBN1Q5VWQ0 802 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 TMEM236Q5W0B7 351 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 PTRHD1Q6GMV3 140 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 LAIR2Q6ISS4 152 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CES5AQ6NT32 575 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 FBXL22Q6P050 247 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ERAP2Q6P179 960 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 NEK5Q6P3R8 708 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 FAHD1Q6P587 224 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 LRRC69Q6ZNQ3 347 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 EIF3MQ7L2H7 374 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF367Q7RTV3 350 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 NANOGNBQ7Z5D8 188 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 GPR142Q7Z601 462 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 BTLAQ7Z6A9 289 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CTU1Q7Z7A3 348 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF605Q86T29 641 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 TLK2Q86UE8 772 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 HEATR4Q86WZ0 1026 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZZZ3Q8IYH5 903 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CHPFQ8IZ52 775 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 RBFAQ8N0V3 343 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 PGBD5Q8N414 524 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 FAM86B1Q8N7N1 296 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 BEND7Q8N7W2 519 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR52B6Q8NGF0 335 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 LILRB4Q8NHJ6 448 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 NETO1Q8TDF5 533 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CSGALNACT1Q8TDX6 532 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms