RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 S100A3P33764 101 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 DRD3P35462 400 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 POLE2P56282 527 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 PLA2G4EQ3MJ16 856 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 C6orf52Q5T4I8 152 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 EGFLAMQ63HQ2 1017 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 ANKRD54Q6NXT1 300 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 ZBTB49Q6ZSB9 765 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 TRAPPC5Q8IUR0 188 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 CFAP206Q8IYR0 622 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 CLHC1Q8NHS4 586 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 ELSPBP1Q96BH3 223 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 ITCHQ96J02 903 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 HIC2Q96JB3 615 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 ZNF696Q9H7X3 374 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 RMND5AQ9H871 391 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 RUVBL1Q9Y265 456 aaKnown RBP17.1■□□□□ 0.33
SFXN1-208ENST00000507823 MGAT4DA6NG13 374 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 ANXA6P08133 673 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 PBLDP30039 288 aaPredicted RBP17.1■□□□□ 0.33
SFXN1-208ENST00000507823 RPA4Q13156 261 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 NHSL2Q5HYW2 709 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 UNC5DQ6UXZ4 953 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 CARM1Q86X55 608 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 ST13P4Q8IZP2 240 aaPredicted RBP17.1■□□□□ 0.33
SFXN1-208ENST00000507823 PHC3Q8NDX5 983 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 OR9A1PQ8NGU1 263 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 APOLD1Q96LR9 279 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 FAM192AQ9GZU8 254 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 RSPH9Q9H1X1 276 aaPredicted RBP17.1■□□□□ 0.33
SFXN1-208ENST00000507823 EHD1Q9H4M9 534 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 KAT8Q9H7Z6 458 aaKnown RBP17.1■□□□□ 0.33
SFXN1-208ENST00000507823 ITM2CQ9NQX7 267 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 SIRT5Q9NXA8 310 aa17.1■□□□□ 0.33
SFXN1-208ENST00000507823 SOCS2O14508 198 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 ACOX3O15254 700 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 POP7O75817 140 aaKnown RBP17.09■□□□□ 0.33
SFXN1-208ENST00000507823 PRSS23O95084 383 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 EPHX1P07099 455 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 CKMT2P17540 419 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 PSMC3P17980 439 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 TEAD1P28347 426 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 OR2T12Q8NG77 320 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 MRPL38Q96DV4 380 aaKnown RBP17.09■□□□□ 0.33
SFXN1-208ENST00000507823 TSSK3Q96PN8 268 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 C9orf16Q9BUW7 83 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 OR52A5Q9H2C5 316 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 NKX2-4Q9H2Z4 354 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 KCNE2Q9Y6J6 123 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 FAM220BPB1ANY3 271 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 DLGAP1O14490 977 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 SMIM18P0DKX4 95 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 CAMK2GQ13555 558 aaPredicted RBP17.09■□□□□ 0.33
SFXN1-208ENST00000507823 NRF1Q16656 503 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 CAPN13Q6MZZ7 669 aaPredicted RBP17.09■□□□□ 0.33
SFXN1-208ENST00000507823 MYADMQ96S97 322 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 SLC6A13Q9NSD5 602 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 PCDHB14Q9Y5E9 798 aa17.09■□□□□ 0.33
SFXN1-208ENST00000507823 ANTXRLA6NF34 631 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 NPPBP16860 134 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 TAS2R38P59533 333 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 SRSF11Q05519 484 aaKnown RBP17.08■□□□□ 0.33
SFXN1-208ENST00000507823 TMTC4Q5T4D3 741 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 AGBL4Q5VU57 503 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 OXR1Q8N573 874 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 ST13P5Q8NFI4 369 aaPredicted RBP17.08■□□□□ 0.33
SFXN1-208ENST00000507823 OR7G3Q8NG95 312 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 OR8J2Q8NGG1 315 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 POP5Q969H6 163 aaKnown RBP17.08■□□□□ 0.33
SFXN1-208ENST00000507823 MED8Q96G25 268 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 TRAPPC9Q96Q05 1148 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 ZDHHC5Q9C0B5 715 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.08■□□□□ 0.33
SFXN1-208ENST00000507823 TSC22D4Q9Y3Q8 395 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 DNMT3AQ9Y6K1 912 aaPredicted RBP17.08■□□□□ 0.33
SFXN1-208ENST00000507823 STON1Q9Y6Q2 735 aa17.08■□□□□ 0.33
SFXN1-208ENST00000507823 SCN2BO60939 215 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 SCELO95171 688 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 MAGEA10P43363 369 aaPredicted RBP17.08■□□□□ 0.32
SFXN1-208ENST00000507823 TRPC1P48995 793 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 TBPL1P62380 186 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 MYBPC1Q00872 1141 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 MAP7Q14244 749 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 PNCKQ6P2M8 343 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 YAF2Q8IY57 180 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 LAS2Q8IYD9 372 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 PLA2G15Q8NCC3 412 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 CHTF18Q8WVB6 975 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 NEIL2Q969S2 332 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 EGLN2Q96KS0 407 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 ANKRD60Q9BZ19 345 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 MAPRE3Q9UPY8 281 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 GMEB1Q9Y692 573 aa17.08■□□□□ 0.32
SFXN1-208ENST00000507823 PCM1Q15154 2024 aa17.07■□□□□ 0.32
SFXN1-208ENST00000507823 ARHGAP10A1A4S6 786 aa17.07■□□□□ 0.32
SFXN1-208ENST00000507823 RASAL1O95294 804 aa17.07■□□□□ 0.32
SFXN1-208ENST00000507823 IL1RNP18510 177 aa17.07■□□□□ 0.32
SFXN1-208ENST00000507823 WNT3P56703 355 aa17.07■□□□□ 0.32
SFXN1-208ENST00000507823 HYAL1Q12794 435 aa17.07■□□□□ 0.32
SFXN1-208ENST00000507823 UGT8Q16880 541 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms