RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 IFITM10A6NMD0 228 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 FAM72CH0Y354 149 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 H0YAE9 185 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 SLC30A4O14863 429 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 PCDH7O60245 1069 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 FCGR3BO75015 233 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 DFFBO76075 338 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 ZNF432O94892 652 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 RLN1P04808 185 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 SUPT20HL2P0C7V6 817 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 EPORP19235 508 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 CD27P26842 260 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 PSMB4P28070 264 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 CDR2Q01850 454 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 YWHAHQ04917 246 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 HERC3Q15034 1050 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 RBBP7Q16576 425 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 KIAA1644Q3SXP7 199 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 LBHQ53QV2 105 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 XKR3Q5GH77 459 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 FAM72AQ5TYM5 149 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 FAM72DQ6L9T8 149 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 MARK2Q7KZI7 788 aaKnown RBP3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 FAM72BQ86X60 149 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 TMCO5AQ8N6Q1 288 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 NHLRC2Q8NBF2 726 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 ATAD1Q8NBU5 361 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 KBTBD8Q8NFY9 601 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 OR10Q1Q8NGQ4 319 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 OR13C3Q8NGS6 347 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 P2RX5Q93086 422 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 ZNF524Q96C55 264 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 SENP5Q96HI0 755 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 CCDC3Q9BQI4 270 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 ACTL8Q9H568 366 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 LMAN1LQ9HAT1 526 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 SIX2Q9NPC8 291 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 CHST11Q9NPF2 352 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 INTS9Q9NV88 658 aaKnown RBP3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 PKD2L2Q9NZM6 624 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 VPS18Q9P253 973 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 ITGA11Q9UKX5 1188 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 TNNQ9UQP3 1299 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 CHKBQ9Y259 395 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 LRP12Q9Y561 859 aa3.68□□□□□ -1.82
HMGB1P28-201ENST00000507778 HEG1Q9ULI3 1381 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 OOEPA6NGQ2 149 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 YDJCA8MPS7 323 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 O00370 1275 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 FLRT2O43155 660 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 PPIP5K2O43314 1243 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 PRAF2O60831 178 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 DDHD2O94830 711 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 NGFP01138 241 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 C9P02748 559 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 APOHP02749 345 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 STAG3L1P0CL83 205 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 ERVK-10P10266 1014 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 LBPP18428 481 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 ANOS1P23352 680 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 TIA1P31483 386 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 COPB2P35606 906 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 TIMP3P35625 211 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 CDX1P47902 265 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 KCNJ10P78508 379 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 GCNT1Q02742 428 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 CACNG1Q06432 222 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 SULT2A1Q06520 285 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 TRAP1Q12931 704 aaKnown RBP3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 SQLEQ14534 574 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 P2RY6Q15077 328 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 E2F5Q15329 346 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 TAZQ16635 292 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 MEP1BQ16820 701 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 ANKRD20A4Q4UJ75 823 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 PDLIM3Q53GG5 364 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 ANKRD20A8PQ5CZ79 823 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 ANKRD20A2Q5SQ80 823 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 ANKRD20A1Q5TYW2 823 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 ANKRD20A3Q5VUR7 823 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 LYSMD4Q5XG99 296 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 TXNRD3NBQ6F5E7 133 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 CASC4Q6P4E1 433 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 CYB5D1Q6P9G0 228 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 CTR9Q6PD62 1173 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 OTOAQ7RTW8 1153 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 SLC16A9Q7RTY1 509 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 PIGZQ86VD9 579 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 HOOK3Q86VS8 718 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 IQCA1Q86XH1 822 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 ZNF843Q8N446 348 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 SLC26A7Q8TE54 656 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 SEPT1Q8WYJ6 367 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 RIT1Q92963 219 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 PYCR2Q96C36 320 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 MAP3K3Q99759 626 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 GPATCH1Q9BRR8 931 aaKnown RBP3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 FAM49AQ9H0Q0 323 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 SDF2L1Q9HCN8 221 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 KCNJ14Q9UNX9 436 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms