RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 FAM167BQ9BTA0 163 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 NAT9Q9BTE0 207 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 ZNF552Q9H707 407 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 ZNF304Q9HCX3 659 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 MRPS30Q9NP92 439 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 SLC22A11Q9NSA0 550 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 ZNF282Q9UDV7 671 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 KLHL20Q9Y2M5 609 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 ESPL1Q14674 2120 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 A0A0J9YVX5 310 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 A0A1W2PPV9 198 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 TCRBV7S3A2A0A539 114 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 VSTM2BA6NLU5 285 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 ZSCAN12O43309 604 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 CTSVO60911 334 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 CNOT3O75175 753 aaKnown RBP13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 AGFG2O95081 481 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 FDXRP22570 491 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 ITGA3P26006 1051 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 AP2B1P63010 937 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 PRDX1Q06830 199 aaKnown RBP13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 PTK6Q13882 451 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 TRIP13Q15645 432 aaPredicted RBP13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 LONRF1Q17RB8 773 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 TUBB8Q3ZCM7 444 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 FAM69BQ5VUD6 431 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 PRAMEF13Q5VWM6 474 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 PCGF5Q86SE9 256 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 ACTRT1Q8TDG2 376 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 INPP5DQ92835 1189 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 SERPINB12Q96P63 405 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 DPH7Q9BTV6 452 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 ILKAPQ9H0C8 392 aaPredicted RBP13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 LRRC4CQ9HCJ2 640 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 C14orf105Q9NVL8 296 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 CIDEBQ9UHD4 219 aa13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 TNRC6AQ8NDV7 1962 aaKnown RBP13.79□□□□□ -0.2
HMGCS1-203ENST00000507004 ARHGEF33A8MVX0 844 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 GOLGA8KD6RF30 607 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 GOLGA8TH3BQL2 631 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 TTC4O95801 387 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 DDAH2O95865 285 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 CTSBP07858 339 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 EZRP15311 586 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 SKIV2L2P42285 1042 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 MAGEA3P43357 314 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 CLCN7P51798 805 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 PNLIPRP1P54315 467 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 NDUFA9Q16795 377 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 PRTGQ2VWP7 1150 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 CCSMST1Q4G0I0 132 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 ACSBG2Q5FVE4 666 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 AGAP7PQ5VUJ5 663 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 Q6ZS92 163 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 PPIL6Q8IXY8 311 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 Q8NA96 180 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 PPP4R1Q8TF05 950 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 RERGQ96A58 199 aaPredicted RBP13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 MIEF2Q96C03 454 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 AGAP4Q96P64 663 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 CRB3Q9BUF7 120 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 FAM129AQ9BZQ8 928 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 PCBD2Q9H0N5 130 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 EPS8L2Q9H6S3 715 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 AGPAT4Q9NRZ5 378 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 ZC3H7BQ9UGR2 993 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 FBXL4Q9UKA2 621 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 DHRS7Q9Y394 339 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 MAD1L1Q9Y6D9 718 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 HECTD1Q9ULT8 2610 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 PCM1Q15154 2024 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 LRRK2Q5S007 2527 aa13.78□□□□□ -0.2
HMGCS1-203ENST00000507004 IGLV3-12A0A075B6K2 115 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 ZCWPW2A0A1B0GU75 182 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 MAP2K7O14733 419 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 AVILO75366 819 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 CYC1P08574 325 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 FBLP22087 321 aaKnown RBP13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 GNLYP22749 145 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 CXCR2P25025 360 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 MCM3P25205 808 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 RGS4P49798 205 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 DSG2Q14126 1118 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 ANKRD22Q5VYY1 191 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 ICE2Q659A1 982 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 TTC27Q6P3X3 843 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 COX15Q7KZN9 410 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 REXO1L1PQ8IX06 675 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 NAT8LQ8N9F0 302 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 STT3BQ8TCJ2 826 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 ASB11Q8WXH4 323 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 CABS1Q96KC9 395 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 PSMG3-AS1Q96PY0 264 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 WDR77Q9BQA1 342 aaPredicted RBP13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 MFRPQ9BY79 579 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 LHPPQ9H008 270 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 SLC6A20Q9NP91 592 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms